Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7n-4A0A075B620 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav7n-4A0A075B620 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trav7n-4A0A075B620 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trav7n-4A0A075B620 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav7n-4A0A075B620 Gm22567-201ENSMUST00000175542 342 ntBASIC16.36■□□□□ 0.21
Trav7n-4A0A075B620 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav7n-4A0A075B620 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav7n-4A0A075B620 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav7n-4A0A075B620 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav7n-4A0A075B620 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav7n-4A0A075B620 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav7n-4A0A075B620 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav7n-4A0A075B620 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav7n-4A0A075B620 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav7n-4A0A075B620 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav7n-4A0A075B620 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav7n-4A0A075B620 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav7n-4A0A075B620 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav7n-4A0A075B620 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav7n-4A0A075B620 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav7n-4A0A075B620 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Trav7n-4A0A075B620 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav7n-4A0A075B620 Gm37136-201ENSMUST00000194368 194 ntBASIC16.33■□□□□ 0.2
Trav7n-4A0A075B620 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav7n-4A0A075B620 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav7n-4A0A075B620 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trav7n-4A0A075B620 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav7n-4A0A075B620 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav7n-4A0A075B620 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav7n-4A0A075B620 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav7n-4A0A075B620 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav7n-4A0A075B620 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav7n-4A0A075B620 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trav7n-4A0A075B620 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Trav7n-4A0A075B620 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav7n-4A0A075B620 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav7n-4A0A075B620 AC164433.2-201ENSMUST00000226346 1701 ntBASIC16.31■□□□□ 0.2
Trav7n-4A0A075B620 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav7n-4A0A075B620 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav7n-4A0A075B620 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav7n-4A0A075B620 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav7n-4A0A075B620 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav7n-4A0A075B620 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trav7n-4A0A075B620 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav7n-4A0A075B620 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trav7n-4A0A075B620 Zfp131-205ENSMUST00000223812 663 ntBASIC16.3■□□□□ 0.2
Trav7n-4A0A075B620 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav7n-4A0A075B620 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav7n-4A0A075B620 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
Trav7n-4A0A075B620 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav7n-4A0A075B620 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Trav7n-4A0A075B620 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trav7n-4A0A075B620 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trav7n-4A0A075B620 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav7n-4A0A075B620 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav7n-4A0A075B620 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC16.29■□□□□ 0.2
Trav7n-4A0A075B620 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav7n-4A0A075B620 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav7n-4A0A075B620 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trav7n-4A0A075B620 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav7n-4A0A075B620 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav7n-4A0A075B620 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav7n-4A0A075B620 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav7n-4A0A075B620 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav7n-4A0A075B620 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trav7n-4A0A075B620 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trav7n-4A0A075B620 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav7n-4A0A075B620 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav7n-4A0A075B620 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav7n-4A0A075B620 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav7n-4A0A075B620 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav7n-4A0A075B620 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trav7n-4A0A075B620 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.27■□□□□ 0.2
Trav7n-4A0A075B620 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav7n-4A0A075B620 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav7n-4A0A075B620 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav7n-4A0A075B620 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trav7n-4A0A075B620 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Trav7n-4A0A075B620 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav7n-4A0A075B620 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7n-4A0A075B620 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7n-4A0A075B620 Gm9397-201ENSMUST00000200125 605 ntBASIC16.26■□□□□ 0.19
Trav7n-4A0A075B620 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav7n-4A0A075B620 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
Trav7n-4A0A075B620 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7n-4A0A075B620 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7n-4A0A075B620 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7n-4A0A075B620 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7n-4A0A075B620 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7n-4A0A075B620 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Trav7n-4A0A075B620 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7n-4A0A075B620 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav7n-4A0A075B620 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.25■□□□□ 0.19
Trav7n-4A0A075B620 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC16.25■□□□□ 0.19
Trav7n-4A0A075B620 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trav7n-4A0A075B620 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav7n-4A0A075B620 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav7n-4A0A075B620 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav7n-4A0A075B620 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms