Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
4933424G06RikA0A140LIP3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
4933424G06RikA0A140LIP3 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
4933424G06RikA0A140LIP3 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
4933424G06RikA0A140LIP3 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
4933424G06RikA0A140LIP3 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
4933424G06RikA0A140LIP3 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
4933424G06RikA0A140LIP3 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
4933424G06RikA0A140LIP3 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
4933424G06RikA0A140LIP3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
4933424G06RikA0A140LIP3 Mir7654-201ENSMUST00000185082 70 ntBASIC14.18□□□□□ -0.14
4933424G06RikA0A140LIP3 Gm28911-201ENSMUST00000188837 117 ntBASIC14.18□□□□□ -0.14
4933424G06RikA0A140LIP3 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.18□□□□□ -0.14
4933424G06RikA0A140LIP3 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.18□□□□□ -0.14
4933424G06RikA0A140LIP3 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
4933424G06RikA0A140LIP3 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
4933424G06RikA0A140LIP3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
4933424G06RikA0A140LIP3 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
4933424G06RikA0A140LIP3 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
4933424G06RikA0A140LIP3 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
4933424G06RikA0A140LIP3 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.18□□□□□ -0.14
4933424G06RikA0A140LIP3 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
4933424G06RikA0A140LIP3 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
4933424G06RikA0A140LIP3 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
4933424G06RikA0A140LIP3 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
4933424G06RikA0A140LIP3 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
4933424G06RikA0A140LIP3 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
4933424G06RikA0A140LIP3 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.17□□□□□ -0.14
4933424G06RikA0A140LIP3 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
4933424G06RikA0A140LIP3 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.17□□□□□ -0.14
4933424G06RikA0A140LIP3 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.17□□□□□ -0.14
4933424G06RikA0A140LIP3 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
4933424G06RikA0A140LIP3 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
4933424G06RikA0A140LIP3 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
4933424G06RikA0A140LIP3 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
4933424G06RikA0A140LIP3 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.17□□□□□ -0.14
4933424G06RikA0A140LIP3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.17□□□□□ -0.14
4933424G06RikA0A140LIP3 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
4933424G06RikA0A140LIP3 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.17□□□□□ -0.14
4933424G06RikA0A140LIP3 Gm9002-201ENSMUST00000178437 499 ntBASIC14.17□□□□□ -0.14
4933424G06RikA0A140LIP3 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.17□□□□□ -0.14
4933424G06RikA0A140LIP3 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.17□□□□□ -0.14
4933424G06RikA0A140LIP3 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.17□□□□□ -0.14
4933424G06RikA0A140LIP3 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.17□□□□□ -0.14
4933424G06RikA0A140LIP3 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.17□□□□□ -0.14
4933424G06RikA0A140LIP3 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
4933424G06RikA0A140LIP3 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
4933424G06RikA0A140LIP3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
4933424G06RikA0A140LIP3 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
4933424G06RikA0A140LIP3 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.17□□□□□ -0.14
4933424G06RikA0A140LIP3 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
4933424G06RikA0A140LIP3 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
4933424G06RikA0A140LIP3 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
4933424G06RikA0A140LIP3 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
4933424G06RikA0A140LIP3 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
4933424G06RikA0A140LIP3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Gm15678-201ENSMUST00000117573 960 ntBASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Gm24420-201ENSMUST00000176676 59 ntBASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Gm8602-201ENSMUST00000184045 607 ntBASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
4933424G06RikA0A140LIP3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
4933424G06RikA0A140LIP3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
4933424G06RikA0A140LIP3 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
4933424G06RikA0A140LIP3 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
4933424G06RikA0A140LIP3 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
4933424G06RikA0A140LIP3 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.15□□□□□ -0.14
4933424G06RikA0A140LIP3 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms