Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
H2afb1S4R1E0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
H2afb1S4R1E0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
H2afb1S4R1E0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
H2afb1S4R1E0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
H2afb1S4R1E0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
H2afb1S4R1E0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
H2afb1S4R1E0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
H2afb1S4R1E0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2afb1S4R1E0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
H2afb1S4R1E0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
H2afb1S4R1E0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2afb1S4R1E0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.6■□□□□ 0.73
H2afb1S4R1E0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2afb1S4R1E0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2afb1S4R1E0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
H2afb1S4R1E0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.6■□□□□ 0.73
H2afb1S4R1E0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.59■□□□□ 0.73
H2afb1S4R1E0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb1S4R1E0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb1S4R1E0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb1S4R1E0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.59■□□□□ 0.73
H2afb1S4R1E0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb1S4R1E0 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.59■□□□□ 0.73
H2afb1S4R1E0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb1S4R1E0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb1S4R1E0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb1S4R1E0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb1S4R1E0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb1S4R1E0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb1S4R1E0 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.58■□□□□ 0.73
H2afb1S4R1E0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
H2afb1S4R1E0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
H2afb1S4R1E0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
H2afb1S4R1E0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
H2afb1S4R1E0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
H2afb1S4R1E0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
H2afb1S4R1E0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
H2afb1S4R1E0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
H2afb1S4R1E0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
H2afb1S4R1E0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
H2afb1S4R1E0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
H2afb1S4R1E0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
H2afb1S4R1E0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
H2afb1S4R1E0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
H2afb1S4R1E0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
H2afb1S4R1E0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
H2afb1S4R1E0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
H2afb1S4R1E0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
H2afb1S4R1E0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
H2afb1S4R1E0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
H2afb1S4R1E0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
H2afb1S4R1E0 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.54■□□□□ 0.72
H2afb1S4R1E0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.54■□□□□ 0.72
H2afb1S4R1E0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
H2afb1S4R1E0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.54■□□□□ 0.72
H2afb1S4R1E0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
H2afb1S4R1E0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H2afb1S4R1E0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H2afb1S4R1E0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H2afb1S4R1E0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
H2afb1S4R1E0 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H2afb1S4R1E0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
H2afb1S4R1E0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H2afb1S4R1E0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
H2afb1S4R1E0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
H2afb1S4R1E0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
H2afb1S4R1E0 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.52■□□□□ 0.72
H2afb1S4R1E0 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
H2afb1S4R1E0 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
H2afb1S4R1E0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
H2afb1S4R1E0 Notumos-201ENSMUST00000151998 2659 ntBASIC19.52■□□□□ 0.72
H2afb1S4R1E0 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.52■□□□□ 0.71
H2afb1S4R1E0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
H2afb1S4R1E0 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
H2afb1S4R1E0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H2afb1S4R1E0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H2afb1S4R1E0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
H2afb1S4R1E0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H2afb1S4R1E0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H2afb1S4R1E0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H2afb1S4R1E0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
H2afb1S4R1E0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
H2afb1S4R1E0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
H2afb1S4R1E0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2afb1S4R1E0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2afb1S4R1E0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H2afb1S4R1E0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
H2afb1S4R1E0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.49■□□□□ 0.71
H2afb1S4R1E0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H2afb1S4R1E0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H2afb1S4R1E0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H2afb1S4R1E0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
H2afb1S4R1E0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
H2afb1S4R1E0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
H2afb1S4R1E0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
H2afb1S4R1E0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
H2afb1S4R1E0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
H2afb1S4R1E0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
H2afb1S4R1E0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms