Protein–RNA interactions for Protein: S4R181

Ccdc166, Coiled-coil domain-containing 166, mousemouse

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc166S4R181 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc166S4R181 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc166S4R181 Gm43566-201ENSMUST00000196851 808 ntBASIC20.83■□□□□ 0.93
Ccdc166S4R181 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Ccdc166S4R181 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc166S4R181 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc166S4R181 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc166S4R181 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.82■□□□□ 0.92
Ccdc166S4R181 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.82■□□□□ 0.92
Ccdc166S4R181 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc166S4R181 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc166S4R181 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc166S4R181 Gm13238-201ENSMUST00000117655 780 ntBASIC20.81■□□□□ 0.92
Ccdc166S4R181 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc166S4R181 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.81■□□□□ 0.92
Ccdc166S4R181 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.81■□□□□ 0.92
Ccdc166S4R181 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc166S4R181 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc166S4R181 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc166S4R181 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.8■□□□□ 0.92
Ccdc166S4R181 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Ccdc166S4R181 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc166S4R181 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Ccdc166S4R181 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc166S4R181 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc166S4R181 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc166S4R181 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Ccdc166S4R181 Gm45102-201ENSMUST00000207427 857 ntBASIC20.79■□□□□ 0.92
Ccdc166S4R181 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc166S4R181 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Ccdc166S4R181 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Ccdc166S4R181 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.78■□□□□ 0.92
Ccdc166S4R181 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc166S4R181 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.78■□□□□ 0.92
Ccdc166S4R181 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc166S4R181 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc166S4R181 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc166S4R181 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc166S4R181 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc166S4R181 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.77■□□□□ 0.92
Ccdc166S4R181 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc166S4R181 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc166S4R181 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ccdc166S4R181 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Ccdc166S4R181 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.76■□□□□ 0.91
Ccdc166S4R181 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Ccdc166S4R181 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc166S4R181 Gm14117-201ENSMUST00000122417 843 ntBASIC20.76■□□□□ 0.91
Ccdc166S4R181 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc166S4R181 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc166S4R181 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.75■□□□□ 0.91
Ccdc166S4R181 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc166S4R181 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Ccdc166S4R181 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc166S4R181 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.75■□□□□ 0.91
Ccdc166S4R181 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc166S4R181 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc166S4R181 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc166S4R181 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Ccdc166S4R181 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc166S4R181 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc166S4R181 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc166S4R181 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Ccdc166S4R181 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc166S4R181 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc166S4R181 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.73■□□□□ 0.91
Ccdc166S4R181 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc166S4R181 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc166S4R181 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Ccdc166S4R181 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc166S4R181 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc166S4R181 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc166S4R181 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc166S4R181 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.72■□□□□ 0.91
Ccdc166S4R181 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.72■□□□□ 0.91
Ccdc166S4R181 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc166S4R181 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc166S4R181 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.72■□□□□ 0.91
Ccdc166S4R181 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc166S4R181 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc166S4R181 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc166S4R181 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc166S4R181 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc166S4R181 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Ccdc166S4R181 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc166S4R181 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc166S4R181 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc166S4R181 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc166S4R181 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc166S4R181 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc166S4R181 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc166S4R181 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.7■□□□□ 0.9
Ccdc166S4R181 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc166S4R181 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.7■□□□□ 0.9
Ccdc166S4R181 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.7■□□□□ 0.9
Ccdc166S4R181 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc166S4R181 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc166S4R181 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ccdc166S4R181 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.69■□□□□ 0.9
Ccdc166S4R181 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms