Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Hmg20aQ9DC33 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Hmg20aQ9DC33 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmg20aQ9DC33 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hmg20aQ9DC33 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hmg20aQ9DC33 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hmg20aQ9DC33 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.83■□□□□ 0.77
Hmg20aQ9DC33 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Hmg20aQ9DC33 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Hmg20aQ9DC33 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Hmg20aQ9DC33 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
Hmg20aQ9DC33 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmg20aQ9DC33 Gm24970-201ENSMUST00000175582 82 ntBASIC19.82■□□□□ 0.76
Hmg20aQ9DC33 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmg20aQ9DC33 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Hmg20aQ9DC33 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hmg20aQ9DC33 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hmg20aQ9DC33 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hmg20aQ9DC33 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hmg20aQ9DC33 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Hmg20aQ9DC33 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hmg20aQ9DC33 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hmg20aQ9DC33 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmg20aQ9DC33 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmg20aQ9DC33 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmg20aQ9DC33 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmg20aQ9DC33 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.79■□□□□ 0.76
Hmg20aQ9DC33 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Hmg20aQ9DC33 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Hmg20aQ9DC33 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.79■□□□□ 0.76
Hmg20aQ9DC33 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.79■□□□□ 0.76
Hmg20aQ9DC33 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmg20aQ9DC33 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmg20aQ9DC33 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hmg20aQ9DC33 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.78■□□□□ 0.76
Hmg20aQ9DC33 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hmg20aQ9DC33 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hmg20aQ9DC33 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hmg20aQ9DC33 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Hmg20aQ9DC33 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Hmg20aQ9DC33 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hmg20aQ9DC33 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Hmg20aQ9DC33 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hmg20aQ9DC33 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hmg20aQ9DC33 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hmg20aQ9DC33 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Hmg20aQ9DC33 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Hmg20aQ9DC33 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.76■□□□□ 0.75
Hmg20aQ9DC33 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hmg20aQ9DC33 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hmg20aQ9DC33 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmg20aQ9DC33 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hmg20aQ9DC33 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Hmg20aQ9DC33 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.74■□□□□ 0.75
Hmg20aQ9DC33 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmg20aQ9DC33 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmg20aQ9DC33 Gm45855-201ENSMUST00000212546 880 ntBASIC19.74■□□□□ 0.75
Hmg20aQ9DC33 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmg20aQ9DC33 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmg20aQ9DC33 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hmg20aQ9DC33 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmg20aQ9DC33 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmg20aQ9DC33 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hmg20aQ9DC33 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hmg20aQ9DC33 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hmg20aQ9DC33 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.73■□□□□ 0.75
Hmg20aQ9DC33 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hmg20aQ9DC33 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hmg20aQ9DC33 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Hmg20aQ9DC33 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hmg20aQ9DC33 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Hmg20aQ9DC33 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.72■□□□□ 0.75
Hmg20aQ9DC33 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hmg20aQ9DC33 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hmg20aQ9DC33 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hmg20aQ9DC33 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hmg20aQ9DC33 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Hmg20aQ9DC33 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmg20aQ9DC33 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmg20aQ9DC33 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.71■□□□□ 0.75
Hmg20aQ9DC33 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmg20aQ9DC33 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.71■□□□□ 0.75
Hmg20aQ9DC33 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hmg20aQ9DC33 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Hmg20aQ9DC33 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.71■□□□□ 0.75
Hmg20aQ9DC33 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmg20aQ9DC33 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmg20aQ9DC33 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmg20aQ9DC33 Gm30023-201ENSMUST00000197970 889 ntBASIC19.7■□□□□ 0.74
Hmg20aQ9DC33 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.7■□□□□ 0.74
Hmg20aQ9DC33 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.7■□□□□ 0.74
Hmg20aQ9DC33 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hmg20aQ9DC33 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
Hmg20aQ9DC33 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.69■□□□□ 0.74
Hmg20aQ9DC33 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmg20aQ9DC33 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmg20aQ9DC33 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hmg20aQ9DC33 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Hmg20aQ9DC33 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Hmg20aQ9DC33 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms