Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ShpkQ9D5J6 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.24■□□□□ 0.51
ShpkQ9D5J6 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
ShpkQ9D5J6 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ShpkQ9D5J6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.23■□□□□ 0.51
ShpkQ9D5J6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ShpkQ9D5J6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ShpkQ9D5J6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ShpkQ9D5J6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ShpkQ9D5J6 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
ShpkQ9D5J6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ShpkQ9D5J6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
ShpkQ9D5J6 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.22■□□□□ 0.51
ShpkQ9D5J6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ShpkQ9D5J6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ShpkQ9D5J6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
ShpkQ9D5J6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
ShpkQ9D5J6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.2■□□□□ 0.5
ShpkQ9D5J6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ShpkQ9D5J6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ShpkQ9D5J6 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ShpkQ9D5J6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ShpkQ9D5J6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.2■□□□□ 0.5
ShpkQ9D5J6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ShpkQ9D5J6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
ShpkQ9D5J6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.19■□□□□ 0.5
ShpkQ9D5J6 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ShpkQ9D5J6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ShpkQ9D5J6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ShpkQ9D5J6 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ShpkQ9D5J6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ShpkQ9D5J6 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ShpkQ9D5J6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ShpkQ9D5J6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ShpkQ9D5J6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ShpkQ9D5J6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ShpkQ9D5J6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ShpkQ9D5J6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
ShpkQ9D5J6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.17■□□□□ 0.5
ShpkQ9D5J6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
ShpkQ9D5J6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.17■□□□□ 0.5
ShpkQ9D5J6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ShpkQ9D5J6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ShpkQ9D5J6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ShpkQ9D5J6 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ShpkQ9D5J6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ShpkQ9D5J6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ShpkQ9D5J6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ShpkQ9D5J6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ShpkQ9D5J6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ShpkQ9D5J6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ShpkQ9D5J6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.15■□□□□ 0.5
ShpkQ9D5J6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ShpkQ9D5J6 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.15■□□□□ 0.5
ShpkQ9D5J6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ShpkQ9D5J6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ShpkQ9D5J6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
ShpkQ9D5J6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.14■□□□□ 0.49
ShpkQ9D5J6 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
ShpkQ9D5J6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ShpkQ9D5J6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ShpkQ9D5J6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ShpkQ9D5J6 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.13■□□□□ 0.49
ShpkQ9D5J6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ShpkQ9D5J6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ShpkQ9D5J6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
ShpkQ9D5J6 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ShpkQ9D5J6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ShpkQ9D5J6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
ShpkQ9D5J6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.12■□□□□ 0.49
ShpkQ9D5J6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
ShpkQ9D5J6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
ShpkQ9D5J6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.12■□□□□ 0.49
ShpkQ9D5J6 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
ShpkQ9D5J6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ShpkQ9D5J6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ShpkQ9D5J6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ShpkQ9D5J6 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ShpkQ9D5J6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ShpkQ9D5J6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ShpkQ9D5J6 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ShpkQ9D5J6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ShpkQ9D5J6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ShpkQ9D5J6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ShpkQ9D5J6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
ShpkQ9D5J6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
ShpkQ9D5J6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
ShpkQ9D5J6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ShpkQ9D5J6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ShpkQ9D5J6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ShpkQ9D5J6 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.09■□□□□ 0.49
ShpkQ9D5J6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ShpkQ9D5J6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ShpkQ9D5J6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ShpkQ9D5J6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ShpkQ9D5J6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ShpkQ9D5J6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ShpkQ9D5J6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ShpkQ9D5J6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ShpkQ9D5J6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms