Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retreg3Q9CQV4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Retreg3Q9CQV4 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.93■■□□□ 1.1
Retreg3Q9CQV4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.93■■□□□ 1.1
Retreg3Q9CQV4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Retreg3Q9CQV4 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
Retreg3Q9CQV4 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retreg3Q9CQV4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retreg3Q9CQV4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Retreg3Q9CQV4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retreg3Q9CQV4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Retreg3Q9CQV4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Retreg3Q9CQV4 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Retreg3Q9CQV4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Retreg3Q9CQV4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retreg3Q9CQV4 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retreg3Q9CQV4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retreg3Q9CQV4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Retreg3Q9CQV4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retreg3Q9CQV4 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retreg3Q9CQV4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Retreg3Q9CQV4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Retreg3Q9CQV4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Retreg3Q9CQV4 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retreg3Q9CQV4 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retreg3Q9CQV4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.9■■□□□ 1.1
Retreg3Q9CQV4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
Retreg3Q9CQV4 Gm10420-201ENSMUST00000121713 882 ntBASIC21.9■■□□□ 1.1
Retreg3Q9CQV4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
Retreg3Q9CQV4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Retreg3Q9CQV4 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Retreg3Q9CQV4 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retreg3Q9CQV4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retreg3Q9CQV4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retreg3Q9CQV4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.88■■□□□ 1.09
Retreg3Q9CQV4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retreg3Q9CQV4 Gm22567-201ENSMUST00000175542 342 ntBASIC21.88■■□□□ 1.09
Retreg3Q9CQV4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retreg3Q9CQV4 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Retreg3Q9CQV4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retreg3Q9CQV4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retreg3Q9CQV4 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retreg3Q9CQV4 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retreg3Q9CQV4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
Retreg3Q9CQV4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retreg3Q9CQV4 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Retreg3Q9CQV4 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Retreg3Q9CQV4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
Retreg3Q9CQV4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retreg3Q9CQV4 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Retreg3Q9CQV4 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.86■■□□□ 1.09
Retreg3Q9CQV4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retreg3Q9CQV4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retreg3Q9CQV4 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.86■■□□□ 1.09
Retreg3Q9CQV4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Retreg3Q9CQV4 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Retreg3Q9CQV4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retreg3Q9CQV4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.85■■□□□ 1.09
Retreg3Q9CQV4 Gm5812-201ENSMUST00000061073 957 ntBASIC21.85■■□□□ 1.09
Retreg3Q9CQV4 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retreg3Q9CQV4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.84■■□□□ 1.09
Retreg3Q9CQV4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retreg3Q9CQV4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.84■■□□□ 1.09
Retreg3Q9CQV4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Retreg3Q9CQV4 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retreg3Q9CQV4 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retreg3Q9CQV4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retreg3Q9CQV4 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Retreg3Q9CQV4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Retreg3Q9CQV4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Retreg3Q9CQV4 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Retreg3Q9CQV4 Gm15039-201ENSMUST00000118914 875 ntBASIC21.83■■□□□ 1.09
Retreg3Q9CQV4 Gm5921-201ENSMUST00000075898 882 ntBASIC21.83■■□□□ 1.09
Retreg3Q9CQV4 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Retreg3Q9CQV4 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Retreg3Q9CQV4 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.82■■□□□ 1.08
Retreg3Q9CQV4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Retreg3Q9CQV4 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retreg3Q9CQV4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retreg3Q9CQV4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retreg3Q9CQV4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retreg3Q9CQV4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retreg3Q9CQV4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.81■■□□□ 1.08
Retreg3Q9CQV4 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retreg3Q9CQV4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retreg3Q9CQV4 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retreg3Q9CQV4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retreg3Q9CQV4 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retreg3Q9CQV4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Retreg3Q9CQV4 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Retreg3Q9CQV4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retreg3Q9CQV4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retreg3Q9CQV4 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Retreg3Q9CQV4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retreg3Q9CQV4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retreg3Q9CQV4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retreg3Q9CQV4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Retreg3Q9CQV4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retreg3Q9CQV4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retreg3Q9CQV4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms