Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.4■□□□□ 0.86
Ska1Q9CPV1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ska1Q9CPV1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Ska1Q9CPV1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Ska1Q9CPV1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ska1Q9CPV1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ska1Q9CPV1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ska1Q9CPV1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Ska1Q9CPV1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ska1Q9CPV1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Ska1Q9CPV1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ska1Q9CPV1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ska1Q9CPV1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ska1Q9CPV1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.39■□□□□ 0.85
Ska1Q9CPV1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Ska1Q9CPV1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ska1Q9CPV1 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ska1Q9CPV1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ska1Q9CPV1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ska1Q9CPV1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ska1Q9CPV1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.38■□□□□ 0.85
Ska1Q9CPV1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ska1Q9CPV1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ska1Q9CPV1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Ska1Q9CPV1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ska1Q9CPV1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ska1Q9CPV1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ska1Q9CPV1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ska1Q9CPV1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ska1Q9CPV1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ska1Q9CPV1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ska1Q9CPV1 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.37■□□□□ 0.85
Ska1Q9CPV1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ska1Q9CPV1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Ska1Q9CPV1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.36■□□□□ 0.85
Ska1Q9CPV1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.36■□□□□ 0.85
Ska1Q9CPV1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ska1Q9CPV1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ska1Q9CPV1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ska1Q9CPV1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ska1Q9CPV1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ska1Q9CPV1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ska1Q9CPV1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Ska1Q9CPV1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ska1Q9CPV1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ska1Q9CPV1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ska1Q9CPV1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ska1Q9CPV1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ska1Q9CPV1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ska1Q9CPV1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ska1Q9CPV1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.33■□□□□ 0.85
Ska1Q9CPV1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ska1Q9CPV1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ska1Q9CPV1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ska1Q9CPV1 Gm45364-201ENSMUST00000210883 159 ntBASIC20.32■□□□□ 0.84
Ska1Q9CPV1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ska1Q9CPV1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ska1Q9CPV1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.32■□□□□ 0.84
Ska1Q9CPV1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.31■□□□□ 0.84
Ska1Q9CPV1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.31■□□□□ 0.84
Ska1Q9CPV1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ska1Q9CPV1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.31■□□□□ 0.84
Ska1Q9CPV1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ska1Q9CPV1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ska1Q9CPV1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Ska1Q9CPV1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Ska1Q9CPV1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ska1Q9CPV1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ska1Q9CPV1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ska1Q9CPV1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ska1Q9CPV1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ska1Q9CPV1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.29■□□□□ 0.84
Ska1Q9CPV1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ska1Q9CPV1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Ska1Q9CPV1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ska1Q9CPV1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ska1Q9CPV1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ska1Q9CPV1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ska1Q9CPV1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ska1Q9CPV1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Ska1Q9CPV1 Terc-201ENSMUST00000082862 423 ntBASIC20.28■□□□□ 0.84
Ska1Q9CPV1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ska1Q9CPV1 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ska1Q9CPV1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ska1Q9CPV1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ska1Q9CPV1 Gm22567-201ENSMUST00000175542 342 ntBASIC20.27■□□□□ 0.84
Ska1Q9CPV1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ska1Q9CPV1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ska1Q9CPV1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Ska1Q9CPV1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ska1Q9CPV1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ska1Q9CPV1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ska1Q9CPV1 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.26■□□□□ 0.83
Ska1Q9CPV1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ska1Q9CPV1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ska1Q9CPV1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ska1Q9CPV1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
Ska1Q9CPV1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.25■□□□□ 0.83
Ska1Q9CPV1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ska1Q9CPV1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms