Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.78■■□□□ 1.08
Cdk9Q99J95 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdk9Q99J95 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdk9Q99J95 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.78■■□□□ 1.08
Cdk9Q99J95 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.78■■□□□ 1.08
Cdk9Q99J95 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cdk9Q99J95 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdk9Q99J95 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.77■■□□□ 1.08
Cdk9Q99J95 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.77■■□□□ 1.08
Cdk9Q99J95 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cdk9Q99J95 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cdk9Q99J95 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cdk9Q99J95 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cdk9Q99J95 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.77■■□□□ 1.08
Cdk9Q99J95 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Cdk9Q99J95 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Cdk9Q99J95 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cdk9Q99J95 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cdk9Q99J95 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cdk9Q99J95 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cdk9Q99J95 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdk9Q99J95 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdk9Q99J95 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdk9Q99J95 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Cdk9Q99J95 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdk9Q99J95 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.75■■□□□ 1.07
Cdk9Q99J95 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.74■■□□□ 1.07
Cdk9Q99J95 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Cdk9Q99J95 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdk9Q99J95 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Cdk9Q99J95 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.74■■□□□ 1.07
Cdk9Q99J95 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.74■■□□□ 1.07
Cdk9Q99J95 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdk9Q99J95 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdk9Q99J95 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdk9Q99J95 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cdk9Q99J95 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.73■■□□□ 1.07
Cdk9Q99J95 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cdk9Q99J95 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.73■■□□□ 1.07
Cdk9Q99J95 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdk9Q99J95 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdk9Q99J95 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Cdk9Q99J95 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.72■■□□□ 1.07
Cdk9Q99J95 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdk9Q99J95 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdk9Q99J95 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cdk9Q99J95 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdk9Q99J95 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Cdk9Q99J95 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cdk9Q99J95 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.71■■□□□ 1.07
Cdk9Q99J95 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdk9Q99J95 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdk9Q99J95 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cdk9Q99J95 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdk9Q99J95 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdk9Q99J95 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdk9Q99J95 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdk9Q99J95 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Cdk9Q99J95 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdk9Q99J95 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdk9Q99J95 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdk9Q99J95 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cdk9Q99J95 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cdk9Q99J95 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdk9Q99J95 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdk9Q99J95 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Cdk9Q99J95 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Cdk9Q99J95 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdk9Q99J95 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdk9Q99J95 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.68■■□□□ 1.06
Cdk9Q99J95 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.68■■□□□ 1.06
Cdk9Q99J95 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Cdk9Q99J95 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdk9Q99J95 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdk9Q99J95 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Cdk9Q99J95 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cdk9Q99J95 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdk9Q99J95 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Cdk9Q99J95 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdk9Q99J95 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdk9Q99J95 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdk9Q99J95 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Cdk9Q99J95 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cdk9Q99J95 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cdk9Q99J95 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdk9Q99J95 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdk9Q99J95 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdk9Q99J95 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdk9Q99J95 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cdk9Q99J95 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Cdk9Q99J95 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cdk9Q99J95 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
Cdk9Q99J95 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cdk9Q99J95 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdk9Q99J95 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdk9Q99J95 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.63■■□□□ 1.05
Cdk9Q99J95 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cdk9Q99J95 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.63■■□□□ 1.05
Cdk9Q99J95 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.63■■□□□ 1.05
Cdk9Q99J95 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 97.4 ms