Protein–RNA interactions for Protein: Q91XY7

Pcdhga12, Protocadherin gamma A12, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga12Q91XY7 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Pcdhga12Q91XY7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.67■□□□□ 0.9
Pcdhga12Q91XY7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga12Q91XY7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga12Q91XY7 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga12Q91XY7 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.67■□□□□ 0.9
Pcdhga12Q91XY7 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga12Q91XY7 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhga12Q91XY7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhga12Q91XY7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.66■□□□□ 0.9
Pcdhga12Q91XY7 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.66■□□□□ 0.9
Pcdhga12Q91XY7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhga12Q91XY7 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhga12Q91XY7 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhga12Q91XY7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga12Q91XY7 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga12Q91XY7 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga12Q91XY7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga12Q91XY7 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga12Q91XY7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Pcdhga12Q91XY7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga12Q91XY7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Pcdhga12Q91XY7 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga12Q91XY7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga12Q91XY7 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Pcdhga12Q91XY7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.64■□□□□ 0.89
Pcdhga12Q91XY7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhga12Q91XY7 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhga12Q91XY7 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhga12Q91XY7 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga12Q91XY7 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga12Q91XY7 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga12Q91XY7 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga12Q91XY7 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga12Q91XY7 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.62■□□□□ 0.89
Pcdhga12Q91XY7 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhga12Q91XY7 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhga12Q91XY7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhga12Q91XY7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Pcdhga12Q91XY7 Gm45444-201ENSMUST00000211394 898 ntBASIC20.62■□□□□ 0.89
Pcdhga12Q91XY7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Pcdhga12Q91XY7 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga12Q91XY7 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga12Q91XY7 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Pcdhga12Q91XY7 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga12Q91XY7 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga12Q91XY7 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga12Q91XY7 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga12Q91XY7 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.6■□□□□ 0.89
Pcdhga12Q91XY7 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.6■□□□□ 0.89
Pcdhga12Q91XY7 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga12Q91XY7 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga12Q91XY7 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga12Q91XY7 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.6■□□□□ 0.89
Pcdhga12Q91XY7 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Pcdhga12Q91XY7 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Pcdhga12Q91XY7 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Pcdhga12Q91XY7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.59■□□□□ 0.89
Pcdhga12Q91XY7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga12Q91XY7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Pcdhga12Q91XY7 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.59■□□□□ 0.89
Pcdhga12Q91XY7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.59■□□□□ 0.89
Pcdhga12Q91XY7 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.59■□□□□ 0.89
Pcdhga12Q91XY7 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhga12Q91XY7 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Pcdhga12Q91XY7 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhga12Q91XY7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Pcdhga12Q91XY7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhga12Q91XY7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhga12Q91XY7 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhga12Q91XY7 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhga12Q91XY7 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhga12Q91XY7 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga12Q91XY7 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga12Q91XY7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Pcdhga12Q91XY7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Pcdhga12Q91XY7 Gm43566-201ENSMUST00000196851 808 ntBASIC20.57■□□□□ 0.88
Pcdhga12Q91XY7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga12Q91XY7 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga12Q91XY7 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga12Q91XY7 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga12Q91XY7 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhga12Q91XY7 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Pcdhga12Q91XY7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Pcdhga12Q91XY7 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhga12Q91XY7 Gm13238-201ENSMUST00000117655 780 ntBASIC20.56■□□□□ 0.88
Pcdhga12Q91XY7 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhga12Q91XY7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhga12Q91XY7 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhga12Q91XY7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.55■□□□□ 0.88
Pcdhga12Q91XY7 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhga12Q91XY7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
Pcdhga12Q91XY7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.55■□□□□ 0.88
Pcdhga12Q91XY7 Gm5812-201ENSMUST00000061073 957 ntBASIC20.55■□□□□ 0.88
Pcdhga12Q91XY7 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhga12Q91XY7 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.55■□□□□ 0.88
Pcdhga12Q91XY7 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhga12Q91XY7 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhga12Q91XY7 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.54■□□□□ 0.88
Pcdhga12Q91XY7 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms