Protein–RNA interactions for Protein: Q91VA1

Slc44a4, Choline transporter-like protein 4, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a4Q91VA1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Slc44a4Q91VA1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Slc44a4Q91VA1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Slc44a4Q91VA1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Slc44a4Q91VA1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC26.14■■□□□ 1.78
Slc44a4Q91VA1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
Slc44a4Q91VA1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
Slc44a4Q91VA1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Slc44a4Q91VA1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Slc44a4Q91VA1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC26.13■■□□□ 1.77
Slc44a4Q91VA1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Slc44a4Q91VA1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC26.11■■□□□ 1.77
Slc44a4Q91VA1 Gm42699-201ENSMUST00000198104 1657 ntBASIC26.1■■□□□ 1.77
Slc44a4Q91VA1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC26.1■■□□□ 1.77
Slc44a4Q91VA1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Slc44a4Q91VA1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Slc44a4Q91VA1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Slc44a4Q91VA1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Slc44a4Q91VA1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Slc44a4Q91VA1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC26.09■■□□□ 1.77
Slc44a4Q91VA1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
Slc44a4Q91VA1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Slc44a4Q91VA1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC26.08■■□□□ 1.77
Slc44a4Q91VA1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC26.08■■□□□ 1.77
Slc44a4Q91VA1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Slc44a4Q91VA1 Gm28536-201ENSMUST00000190971 1317 ntBASIC26.08■■□□□ 1.77
Slc44a4Q91VA1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Slc44a4Q91VA1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Slc44a4Q91VA1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Slc44a4Q91VA1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Slc44a4Q91VA1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Slc44a4Q91VA1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC26.07■■□□□ 1.76
Slc44a4Q91VA1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC26.07■■□□□ 1.76
Slc44a4Q91VA1 Nsd1-206ENSMUST00000224918 1001 ntBASIC26.07■■□□□ 1.76
Slc44a4Q91VA1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Slc44a4Q91VA1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Slc44a4Q91VA1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Slc44a4Q91VA1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Slc44a4Q91VA1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC26.06■■□□□ 1.76
Slc44a4Q91VA1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC26.06■■□□□ 1.76
Slc44a4Q91VA1 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Slc44a4Q91VA1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Slc44a4Q91VA1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC26.05■■□□□ 1.76
Slc44a4Q91VA1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Slc44a4Q91VA1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC26.03■■□□□ 1.76
Slc44a4Q91VA1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC26.03■■□□□ 1.76
Slc44a4Q91VA1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC26.03■■□□□ 1.76
Slc44a4Q91VA1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
Slc44a4Q91VA1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC26.03■■□□□ 1.76
Slc44a4Q91VA1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Slc44a4Q91VA1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Slc44a4Q91VA1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Slc44a4Q91VA1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Slc44a4Q91VA1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
Slc44a4Q91VA1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
Slc44a4Q91VA1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Slc44a4Q91VA1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Slc44a4Q91VA1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Slc44a4Q91VA1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC26■■□□□ 1.75
Slc44a4Q91VA1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC26■■□□□ 1.75
Slc44a4Q91VA1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC26■■□□□ 1.75
Slc44a4Q91VA1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Slc44a4Q91VA1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC26■■□□□ 1.75
Slc44a4Q91VA1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Slc44a4Q91VA1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Slc44a4Q91VA1 Gm7417-201ENSMUST00000192950 473 ntBASIC25.99■■□□□ 1.75
Slc44a4Q91VA1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Slc44a4Q91VA1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Slc44a4Q91VA1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Slc44a4Q91VA1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Slc44a4Q91VA1 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Slc44a4Q91VA1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
Slc44a4Q91VA1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Slc44a4Q91VA1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Slc44a4Q91VA1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Slc44a4Q91VA1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Slc44a4Q91VA1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
Slc44a4Q91VA1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC25.96■■□□□ 1.75
Slc44a4Q91VA1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC25.96■■□□□ 1.75
Slc44a4Q91VA1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Slc44a4Q91VA1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC25.96■■□□□ 1.75
Slc44a4Q91VA1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
Slc44a4Q91VA1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Slc44a4Q91VA1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Slc44a4Q91VA1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Slc44a4Q91VA1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC25.94■■□□□ 1.74
Slc44a4Q91VA1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC25.94■■□□□ 1.74
Slc44a4Q91VA1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Slc44a4Q91VA1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Slc44a4Q91VA1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Slc44a4Q91VA1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC25.93■■□□□ 1.74
Slc44a4Q91VA1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Slc44a4Q91VA1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Slc44a4Q91VA1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Slc44a4Q91VA1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Slc44a4Q91VA1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Slc44a4Q91VA1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Slc44a4Q91VA1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Slc44a4Q91VA1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Slc44a4Q91VA1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms