Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Trim60Q8VI40 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.48■■□□□ 1.19
Trim60Q8VI40 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim60Q8VI40 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim60Q8VI40 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim60Q8VI40 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim60Q8VI40 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim60Q8VI40 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.48■■□□□ 1.19
Trim60Q8VI40 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim60Q8VI40 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim60Q8VI40 Gm13042-201ENSMUST00000119244 1955 ntBASIC22.47■■□□□ 1.19
Trim60Q8VI40 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim60Q8VI40 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Trim60Q8VI40 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Trim60Q8VI40 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim60Q8VI40 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim60Q8VI40 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim60Q8VI40 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC22.46■■□□□ 1.19
Trim60Q8VI40 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Trim60Q8VI40 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim60Q8VI40 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim60Q8VI40 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim60Q8VI40 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.46■■□□□ 1.19
Trim60Q8VI40 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Trim60Q8VI40 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim60Q8VI40 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim60Q8VI40 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Trim60Q8VI40 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim60Q8VI40 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim60Q8VI40 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Trim60Q8VI40 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim60Q8VI40 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim60Q8VI40 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim60Q8VI40 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim60Q8VI40 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Trim60Q8VI40 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim60Q8VI40 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim60Q8VI40 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Trim60Q8VI40 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim60Q8VI40 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.42■■□□□ 1.18
Trim60Q8VI40 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Trim60Q8VI40 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Trim60Q8VI40 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim60Q8VI40 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim60Q8VI40 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Trim60Q8VI40 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim60Q8VI40 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim60Q8VI40 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim60Q8VI40 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.41■■□□□ 1.18
Trim60Q8VI40 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Trim60Q8VI40 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim60Q8VI40 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim60Q8VI40 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Trim60Q8VI40 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim60Q8VI40 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim60Q8VI40 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim60Q8VI40 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim60Q8VI40 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim60Q8VI40 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim60Q8VI40 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Trim60Q8VI40 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
Trim60Q8VI40 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Trim60Q8VI40 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Trim60Q8VI40 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim60Q8VI40 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim60Q8VI40 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim60Q8VI40 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Trim60Q8VI40 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim60Q8VI40 Gm44428-201ENSMUST00000204474 874 ntBASIC22.38■■□□□ 1.17
Trim60Q8VI40 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Trim60Q8VI40 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim60Q8VI40 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim60Q8VI40 AC153962.1-201ENSMUST00000218530 1948 ntBASIC22.37■■□□□ 1.17
Trim60Q8VI40 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim60Q8VI40 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim60Q8VI40 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim60Q8VI40 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim60Q8VI40 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim60Q8VI40 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Trim60Q8VI40 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Trim60Q8VI40 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim60Q8VI40 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Trim60Q8VI40 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim60Q8VI40 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim60Q8VI40 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim60Q8VI40 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Trim60Q8VI40 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Trim60Q8VI40 AC117245.4-201ENSMUST00000217388 1646 ntBASIC22.35■■□□□ 1.17
Trim60Q8VI40 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Trim60Q8VI40 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim60Q8VI40 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.35■■□□□ 1.17
Trim60Q8VI40 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Trim60Q8VI40 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.35■■□□□ 1.17
Trim60Q8VI40 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim60Q8VI40 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Trim60Q8VI40 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC22.35■■□□□ 1.17
Trim60Q8VI40 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim60Q8VI40 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim60Q8VI40 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Trim60Q8VI40 AC115037.1-201ENSMUST00000223391 2173 ntBASIC22.34■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms