Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Rpa1Q8VEE4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rpa1Q8VEE4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rpa1Q8VEE4 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rpa1Q8VEE4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rpa1Q8VEE4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rpa1Q8VEE4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Rpa1Q8VEE4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rpa1Q8VEE4 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rpa1Q8VEE4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Rpa1Q8VEE4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.79■■□□□ 1.08
Rpa1Q8VEE4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.79■■□□□ 1.08
Rpa1Q8VEE4 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rpa1Q8VEE4 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rpa1Q8VEE4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.79■■□□□ 1.08
Rpa1Q8VEE4 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
Rpa1Q8VEE4 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rpa1Q8VEE4 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rpa1Q8VEE4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rpa1Q8VEE4 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.78■■□□□ 1.08
Rpa1Q8VEE4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rpa1Q8VEE4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.78■■□□□ 1.08
Rpa1Q8VEE4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Rpa1Q8VEE4 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rpa1Q8VEE4 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rpa1Q8VEE4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rpa1Q8VEE4 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.77■■□□□ 1.08
Rpa1Q8VEE4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rpa1Q8VEE4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Rpa1Q8VEE4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rpa1Q8VEE4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.76■■□□□ 1.07
Rpa1Q8VEE4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Rpa1Q8VEE4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rpa1Q8VEE4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rpa1Q8VEE4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rpa1Q8VEE4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rpa1Q8VEE4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rpa1Q8VEE4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.75■■□□□ 1.07
Rpa1Q8VEE4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Rpa1Q8VEE4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.75■■□□□ 1.07
Rpa1Q8VEE4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.75■■□□□ 1.07
Rpa1Q8VEE4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rpa1Q8VEE4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rpa1Q8VEE4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.74■■□□□ 1.07
Rpa1Q8VEE4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.74■■□□□ 1.07
Rpa1Q8VEE4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rpa1Q8VEE4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.73■■□□□ 1.07
Rpa1Q8VEE4 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.73■■□□□ 1.07
Rpa1Q8VEE4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rpa1Q8VEE4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rpa1Q8VEE4 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rpa1Q8VEE4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rpa1Q8VEE4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rpa1Q8VEE4 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rpa1Q8VEE4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rpa1Q8VEE4 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
Rpa1Q8VEE4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rpa1Q8VEE4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rpa1Q8VEE4 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rpa1Q8VEE4 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.71■■□□□ 1.07
Rpa1Q8VEE4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rpa1Q8VEE4 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rpa1Q8VEE4 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Rpa1Q8VEE4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Rpa1Q8VEE4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rpa1Q8VEE4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rpa1Q8VEE4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rpa1Q8VEE4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rpa1Q8VEE4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rpa1Q8VEE4 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.7■■□□□ 1.06
Rpa1Q8VEE4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rpa1Q8VEE4 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rpa1Q8VEE4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rpa1Q8VEE4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Rpa1Q8VEE4 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rpa1Q8VEE4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.69■■□□□ 1.06
Rpa1Q8VEE4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Rpa1Q8VEE4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Rpa1Q8VEE4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rpa1Q8VEE4 Gm22567-201ENSMUST00000175542 342 ntBASIC21.69■■□□□ 1.06
Rpa1Q8VEE4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rpa1Q8VEE4 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.69■■□□□ 1.06
Rpa1Q8VEE4 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rpa1Q8VEE4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.69■■□□□ 1.06
Rpa1Q8VEE4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Rpa1Q8VEE4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rpa1Q8VEE4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rpa1Q8VEE4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rpa1Q8VEE4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rpa1Q8VEE4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.66■■□□□ 1.06
Rpa1Q8VEE4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rpa1Q8VEE4 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.66■■□□□ 1.06
Rpa1Q8VEE4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rpa1Q8VEE4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rpa1Q8VEE4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rpa1Q8VEE4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Rpa1Q8VEE4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rpa1Q8VEE4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rpa1Q8VEE4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rpa1Q8VEE4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms