Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sh3kbp1Q8R550 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.35■■□□□ 1.17
Sh3kbp1Q8R550 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.35■■□□□ 1.17
Sh3kbp1Q8R550 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Sh3kbp1Q8R550 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sh3kbp1Q8R550 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sh3kbp1Q8R550 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Sh3kbp1Q8R550 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Sh3kbp1Q8R550 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sh3kbp1Q8R550 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
Sh3kbp1Q8R550 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sh3kbp1Q8R550 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sh3kbp1Q8R550 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sh3kbp1Q8R550 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sh3kbp1Q8R550 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sh3kbp1Q8R550 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.34■■□□□ 1.17
Sh3kbp1Q8R550 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Sh3kbp1Q8R550 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Sh3kbp1Q8R550 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.17
Sh3kbp1Q8R550 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sh3kbp1Q8R550 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sh3kbp1Q8R550 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.17
Sh3kbp1Q8R550 Gm43566-201ENSMUST00000196851 808 ntBASIC22.33■■□□□ 1.17
Sh3kbp1Q8R550 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sh3kbp1Q8R550 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
Sh3kbp1Q8R550 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Sh3kbp1Q8R550 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sh3kbp1Q8R550 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sh3kbp1Q8R550 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sh3kbp1Q8R550 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.32■■□□□ 1.16
Sh3kbp1Q8R550 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.32■■□□□ 1.16
Sh3kbp1Q8R550 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sh3kbp1Q8R550 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.32■■□□□ 1.16
Sh3kbp1Q8R550 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sh3kbp1Q8R550 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Sh3kbp1Q8R550 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Sh3kbp1Q8R550 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Sh3kbp1Q8R550 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sh3kbp1Q8R550 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sh3kbp1Q8R550 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sh3kbp1Q8R550 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sh3kbp1Q8R550 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sh3kbp1Q8R550 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sh3kbp1Q8R550 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sh3kbp1Q8R550 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Sh3kbp1Q8R550 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.3■■□□□ 1.16
Sh3kbp1Q8R550 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sh3kbp1Q8R550 Gm45444-201ENSMUST00000211394 898 ntBASIC22.29■■□□□ 1.16
Sh3kbp1Q8R550 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Sh3kbp1Q8R550 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sh3kbp1Q8R550 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Sh3kbp1Q8R550 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sh3kbp1Q8R550 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.28■■□□□ 1.16
Sh3kbp1Q8R550 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Sh3kbp1Q8R550 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sh3kbp1Q8R550 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Sh3kbp1Q8R550 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sh3kbp1Q8R550 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.27■■□□□ 1.16
Sh3kbp1Q8R550 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.27■■□□□ 1.16
Sh3kbp1Q8R550 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sh3kbp1Q8R550 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Sh3kbp1Q8R550 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sh3kbp1Q8R550 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sh3kbp1Q8R550 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sh3kbp1Q8R550 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sh3kbp1Q8R550 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sh3kbp1Q8R550 Gm15820-201ENSMUST00000201566 728 ntBASIC22.26■■□□□ 1.15
Sh3kbp1Q8R550 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Sh3kbp1Q8R550 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sh3kbp1Q8R550 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sh3kbp1Q8R550 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sh3kbp1Q8R550 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Sh3kbp1Q8R550 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Sh3kbp1Q8R550 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sh3kbp1Q8R550 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sh3kbp1Q8R550 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
Sh3kbp1Q8R550 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sh3kbp1Q8R550 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.24■■□□□ 1.15
Sh3kbp1Q8R550 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.24■■□□□ 1.15
Sh3kbp1Q8R550 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sh3kbp1Q8R550 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Sh3kbp1Q8R550 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.23■■□□□ 1.15
Sh3kbp1Q8R550 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sh3kbp1Q8R550 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sh3kbp1Q8R550 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Sh3kbp1Q8R550 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC22.23■■□□□ 1.15
Sh3kbp1Q8R550 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sh3kbp1Q8R550 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sh3kbp1Q8R550 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.23■■□□□ 1.15
Sh3kbp1Q8R550 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.23■■□□□ 1.15
Sh3kbp1Q8R550 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Sh3kbp1Q8R550 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sh3kbp1Q8R550 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sh3kbp1Q8R550 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Sh3kbp1Q8R550 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Sh3kbp1Q8R550 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sh3kbp1Q8R550 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Sh3kbp1Q8R550 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Sh3kbp1Q8R550 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.21■■□□□ 1.15
Sh3kbp1Q8R550 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms