Protein–RNA interactions for Protein: Q8R3A2

Cdpf1, Cysteine-rich DPF motif domain-containing protein 1, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdpf1Q8R3A2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdpf1Q8R3A2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdpf1Q8R3A2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdpf1Q8R3A2 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.1■□□□□ 0.49
Cdpf1Q8R3A2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdpf1Q8R3A2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.1■□□□□ 0.49
Cdpf1Q8R3A2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cdpf1Q8R3A2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdpf1Q8R3A2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cdpf1Q8R3A2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Cdpf1Q8R3A2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdpf1Q8R3A2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdpf1Q8R3A2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdpf1Q8R3A2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdpf1Q8R3A2 Gm21956-201ENSMUST00000179946 522 ntBASIC18.09■□□□□ 0.49
Cdpf1Q8R3A2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdpf1Q8R3A2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Cdpf1Q8R3A2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdpf1Q8R3A2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.09■□□□□ 0.49
Cdpf1Q8R3A2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdpf1Q8R3A2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdpf1Q8R3A2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cdpf1Q8R3A2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cdpf1Q8R3A2 Gm22238-201ENSMUST00000175222 88 ntBASIC18.08■□□□□ 0.48
Cdpf1Q8R3A2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.08■□□□□ 0.48
Cdpf1Q8R3A2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.08■□□□□ 0.48
Cdpf1Q8R3A2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cdpf1Q8R3A2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdpf1Q8R3A2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdpf1Q8R3A2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdpf1Q8R3A2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdpf1Q8R3A2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cdpf1Q8R3A2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.07■□□□□ 0.48
Cdpf1Q8R3A2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.07■□□□□ 0.48
Cdpf1Q8R3A2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.07■□□□□ 0.48
Cdpf1Q8R3A2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdpf1Q8R3A2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdpf1Q8R3A2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdpf1Q8R3A2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Cdpf1Q8R3A2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cdpf1Q8R3A2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
Cdpf1Q8R3A2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Cdpf1Q8R3A2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cdpf1Q8R3A2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cdpf1Q8R3A2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdpf1Q8R3A2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.05■□□□□ 0.48
Cdpf1Q8R3A2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdpf1Q8R3A2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdpf1Q8R3A2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Cdpf1Q8R3A2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.04■□□□□ 0.48
Cdpf1Q8R3A2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cdpf1Q8R3A2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cdpf1Q8R3A2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.03■□□□□ 0.48
Cdpf1Q8R3A2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Cdpf1Q8R3A2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Cdpf1Q8R3A2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Cdpf1Q8R3A2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdpf1Q8R3A2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdpf1Q8R3A2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdpf1Q8R3A2 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.02■□□□□ 0.47
Cdpf1Q8R3A2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdpf1Q8R3A2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdpf1Q8R3A2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdpf1Q8R3A2 Gm40881-201ENSMUST00000223397 166 ntBASIC18.01■□□□□ 0.47
Cdpf1Q8R3A2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.01■□□□□ 0.47
Cdpf1Q8R3A2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdpf1Q8R3A2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
Cdpf1Q8R3A2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdpf1Q8R3A2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cdpf1Q8R3A2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdpf1Q8R3A2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdpf1Q8R3A2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdpf1Q8R3A2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdpf1Q8R3A2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdpf1Q8R3A2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdpf1Q8R3A2 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.99■□□□□ 0.47
Cdpf1Q8R3A2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.99■□□□□ 0.47
Cdpf1Q8R3A2 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.98■□□□□ 0.47
Cdpf1Q8R3A2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.98■□□□□ 0.47
Cdpf1Q8R3A2 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.98■□□□□ 0.47
Cdpf1Q8R3A2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.98■□□□□ 0.47
Cdpf1Q8R3A2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.98■□□□□ 0.47
Cdpf1Q8R3A2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdpf1Q8R3A2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdpf1Q8R3A2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.97■□□□□ 0.47
Cdpf1Q8R3A2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cdpf1Q8R3A2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdpf1Q8R3A2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdpf1Q8R3A2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.97■□□□□ 0.47
Cdpf1Q8R3A2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cdpf1Q8R3A2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdpf1Q8R3A2 Gm12922-201ENSMUST00000120626 809 ntBASIC17.96■□□□□ 0.47
Cdpf1Q8R3A2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdpf1Q8R3A2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.96■□□□□ 0.47
Cdpf1Q8R3A2 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.96■□□□□ 0.47
Cdpf1Q8R3A2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdpf1Q8R3A2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdpf1Q8R3A2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cdpf1Q8R3A2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdpf1Q8R3A2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms