Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
Pdlim2Q8R1G6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.34■■□□□ 1.65
Pdlim2Q8R1G6 Golph3-202ENSMUST00000226517 2359 ntBASIC25.34■■□□□ 1.65
Pdlim2Q8R1G6 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
Pdlim2Q8R1G6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Pdlim2Q8R1G6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Pdlim2Q8R1G6 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Pdlim2Q8R1G6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Pdlim2Q8R1G6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Pdlim2Q8R1G6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC25.32■■□□□ 1.64
Pdlim2Q8R1G6 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Pdlim2Q8R1G6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Pdlim2Q8R1G6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Pdlim2Q8R1G6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Pdlim2Q8R1G6 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Pdlim2Q8R1G6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Pdlim2Q8R1G6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Pdlim2Q8R1G6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Pdlim2Q8R1G6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pdlim2Q8R1G6 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pdlim2Q8R1G6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pdlim2Q8R1G6 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pdlim2Q8R1G6 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Pdlim2Q8R1G6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Pdlim2Q8R1G6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Pdlim2Q8R1G6 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pdlim2Q8R1G6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pdlim2Q8R1G6 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pdlim2Q8R1G6 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pdlim2Q8R1G6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pdlim2Q8R1G6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pdlim2Q8R1G6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pdlim2Q8R1G6 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pdlim2Q8R1G6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Pdlim2Q8R1G6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC25.26■■□□□ 1.63
Pdlim2Q8R1G6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
Pdlim2Q8R1G6 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pdlim2Q8R1G6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.25■■□□□ 1.63
Pdlim2Q8R1G6 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pdlim2Q8R1G6 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pdlim2Q8R1G6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pdlim2Q8R1G6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.24■■□□□ 1.63
Pdlim2Q8R1G6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pdlim2Q8R1G6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pdlim2Q8R1G6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pdlim2Q8R1G6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC25.23■■□□□ 1.63
Pdlim2Q8R1G6 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pdlim2Q8R1G6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pdlim2Q8R1G6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Pdlim2Q8R1G6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Pdlim2Q8R1G6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Pdlim2Q8R1G6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Pdlim2Q8R1G6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Pdlim2Q8R1G6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pdlim2Q8R1G6 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pdlim2Q8R1G6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pdlim2Q8R1G6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Pdlim2Q8R1G6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC25.2■■□□□ 1.63
Pdlim2Q8R1G6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.2■■□□□ 1.62
Pdlim2Q8R1G6 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
Pdlim2Q8R1G6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Pdlim2Q8R1G6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.62
Pdlim2Q8R1G6 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Pdlim2Q8R1G6 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pdlim2Q8R1G6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Pdlim2Q8R1G6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC25.19■■□□□ 1.62
Pdlim2Q8R1G6 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pdlim2Q8R1G6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pdlim2Q8R1G6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC25.19■■□□□ 1.62
Pdlim2Q8R1G6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Pdlim2Q8R1G6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Pdlim2Q8R1G6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
Pdlim2Q8R1G6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC25.18■■□□□ 1.62
Pdlim2Q8R1G6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC25.18■■□□□ 1.62
Pdlim2Q8R1G6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Pdlim2Q8R1G6 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Pdlim2Q8R1G6 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Pdlim2Q8R1G6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Pdlim2Q8R1G6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Pdlim2Q8R1G6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.17■■□□□ 1.62
Pdlim2Q8R1G6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.17■■□□□ 1.62
Pdlim2Q8R1G6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
Pdlim2Q8R1G6 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Pdlim2Q8R1G6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Pdlim2Q8R1G6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC25.17■■□□□ 1.62
Pdlim2Q8R1G6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
Pdlim2Q8R1G6 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pdlim2Q8R1G6 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pdlim2Q8R1G6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pdlim2Q8R1G6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
Pdlim2Q8R1G6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Pdlim2Q8R1G6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Pdlim2Q8R1G6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Pdlim2Q8R1G6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Pdlim2Q8R1G6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
Pdlim2Q8R1G6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Pdlim2Q8R1G6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Pdlim2Q8R1G6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Pdlim2Q8R1G6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Pdlim2Q8R1G6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 121.7 ms