Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC26.64■■□□□ 1.85
Sf3a1Q8K4Z5 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Sf3a1Q8K4Z5 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Sf3a1Q8K4Z5 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Sf3a1Q8K4Z5 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC26.63■■□□□ 1.85
Sf3a1Q8K4Z5 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
Sf3a1Q8K4Z5 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Sf3a1Q8K4Z5 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Sf3a1Q8K4Z5 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC26.62■■□□□ 1.85
Sf3a1Q8K4Z5 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Sf3a1Q8K4Z5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Sf3a1Q8K4Z5 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Sf3a1Q8K4Z5 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Sf3a1Q8K4Z5 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Sf3a1Q8K4Z5 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC26.6■■□□□ 1.85
Sf3a1Q8K4Z5 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Sf3a1Q8K4Z5 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Sf3a1Q8K4Z5 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Sf3a1Q8K4Z5 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
Sf3a1Q8K4Z5 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Sf3a1Q8K4Z5 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
Sf3a1Q8K4Z5 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Sf3a1Q8K4Z5 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Sf3a1Q8K4Z5 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Sf3a1Q8K4Z5 Gm22567-201ENSMUST00000175542 342 ntBASIC26.58■■□□□ 1.85
Sf3a1Q8K4Z5 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Sf3a1Q8K4Z5 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
Sf3a1Q8K4Z5 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC26.58■■□□□ 1.85
Sf3a1Q8K4Z5 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Sf3a1Q8K4Z5 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.84
Sf3a1Q8K4Z5 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.84
Sf3a1Q8K4Z5 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Sf3a1Q8K4Z5 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC26.57■■□□□ 1.84
Sf3a1Q8K4Z5 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC26.56■■□□□ 1.84
Sf3a1Q8K4Z5 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC26.56■■□□□ 1.84
Sf3a1Q8K4Z5 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Sf3a1Q8K4Z5 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Sf3a1Q8K4Z5 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Sf3a1Q8K4Z5 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Sf3a1Q8K4Z5 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Sf3a1Q8K4Z5 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC26.55■■□□□ 1.84
Sf3a1Q8K4Z5 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Sf3a1Q8K4Z5 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Sf3a1Q8K4Z5 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
Sf3a1Q8K4Z5 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Sf3a1Q8K4Z5 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
Sf3a1Q8K4Z5 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Sf3a1Q8K4Z5 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC26.54■■□□□ 1.84
Sf3a1Q8K4Z5 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Sf3a1Q8K4Z5 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC26.53■■□□□ 1.84
Sf3a1Q8K4Z5 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Sf3a1Q8K4Z5 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC26.52■■□□□ 1.84
Sf3a1Q8K4Z5 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC26.52■■□□□ 1.84
Sf3a1Q8K4Z5 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Sf3a1Q8K4Z5 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Sf3a1Q8K4Z5 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Sf3a1Q8K4Z5 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
Sf3a1Q8K4Z5 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.84
Sf3a1Q8K4Z5 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Sf3a1Q8K4Z5 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Sf3a1Q8K4Z5 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Sf3a1Q8K4Z5 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Sf3a1Q8K4Z5 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Sf3a1Q8K4Z5 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Sf3a1Q8K4Z5 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Sf3a1Q8K4Z5 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Sf3a1Q8K4Z5 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Sf3a1Q8K4Z5 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Sf3a1Q8K4Z5 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC26.49■■□□□ 1.83
Sf3a1Q8K4Z5 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Sf3a1Q8K4Z5 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
Sf3a1Q8K4Z5 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Sf3a1Q8K4Z5 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Sf3a1Q8K4Z5 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Sf3a1Q8K4Z5 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Sf3a1Q8K4Z5 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
Sf3a1Q8K4Z5 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Sf3a1Q8K4Z5 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Sf3a1Q8K4Z5 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Sf3a1Q8K4Z5 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Sf3a1Q8K4Z5 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Sf3a1Q8K4Z5 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Sf3a1Q8K4Z5 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC26.45■■□□□ 1.83
Sf3a1Q8K4Z5 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Sf3a1Q8K4Z5 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Sf3a1Q8K4Z5 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Sf3a1Q8K4Z5 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
Sf3a1Q8K4Z5 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
Sf3a1Q8K4Z5 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
Sf3a1Q8K4Z5 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Sf3a1Q8K4Z5 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC26.44■■□□□ 1.82
Sf3a1Q8K4Z5 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Sf3a1Q8K4Z5 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Sf3a1Q8K4Z5 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Sf3a1Q8K4Z5 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Sf3a1Q8K4Z5 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Sf3a1Q8K4Z5 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
Sf3a1Q8K4Z5 Gm5921-201ENSMUST00000075898 882 ntBASIC26.43■■□□□ 1.82
Sf3a1Q8K4Z5 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Sf3a1Q8K4Z5 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms