Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Cchcr1Q8K2I2 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Cchcr1Q8K2I2 Scarna2-201ENSMUST00000157560 414 ntBASIC25.74■■□□□ 1.71
Cchcr1Q8K2I2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Cchcr1Q8K2I2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Cchcr1Q8K2I2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Cchcr1Q8K2I2 Gm26766-202ENSMUST00000227544 2347 ntBASIC25.72■■□□□ 1.71
Cchcr1Q8K2I2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
Cchcr1Q8K2I2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
Cchcr1Q8K2I2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Cchcr1Q8K2I2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC25.72■■□□□ 1.71
Cchcr1Q8K2I2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC25.72■■□□□ 1.71
Cchcr1Q8K2I2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Cchcr1Q8K2I2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Cchcr1Q8K2I2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC25.71■■□□□ 1.71
Cchcr1Q8K2I2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Cchcr1Q8K2I2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
Cchcr1Q8K2I2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.7■■□□□ 1.71
Cchcr1Q8K2I2 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Cchcr1Q8K2I2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.7■■□□□ 1.7
Cchcr1Q8K2I2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Cchcr1Q8K2I2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC25.69■■□□□ 1.7
Cchcr1Q8K2I2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Cchcr1Q8K2I2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Cchcr1Q8K2I2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC25.69■■□□□ 1.7
Cchcr1Q8K2I2 Gm16437-201ENSMUST00000025669 507 ntBASIC25.69■■□□□ 1.7
Cchcr1Q8K2I2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
Cchcr1Q8K2I2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Cchcr1Q8K2I2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Cchcr1Q8K2I2 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Cchcr1Q8K2I2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Cchcr1Q8K2I2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Cchcr1Q8K2I2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Cchcr1Q8K2I2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Cchcr1Q8K2I2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Cchcr1Q8K2I2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Cchcr1Q8K2I2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Cchcr1Q8K2I2 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Cchcr1Q8K2I2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Cchcr1Q8K2I2 Gm11687-201ENSMUST00000118911 886 ntBASIC25.66■■□□□ 1.7
Cchcr1Q8K2I2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Cchcr1Q8K2I2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Cchcr1Q8K2I2 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Cchcr1Q8K2I2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Cchcr1Q8K2I2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Cchcr1Q8K2I2 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Cchcr1Q8K2I2 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Cchcr1Q8K2I2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Cchcr1Q8K2I2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Cchcr1Q8K2I2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
Cchcr1Q8K2I2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Cchcr1Q8K2I2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
Cchcr1Q8K2I2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC25.64■■□□□ 1.7
Cchcr1Q8K2I2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
Cchcr1Q8K2I2 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC25.64■■□□□ 1.7
Cchcr1Q8K2I2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
Cchcr1Q8K2I2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Cchcr1Q8K2I2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Cchcr1Q8K2I2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
Cchcr1Q8K2I2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC25.63■■□□□ 1.69
Cchcr1Q8K2I2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Cchcr1Q8K2I2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Cchcr1Q8K2I2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
Cchcr1Q8K2I2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC25.62■■□□□ 1.69
Cchcr1Q8K2I2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Cchcr1Q8K2I2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC25.62■■□□□ 1.69
Cchcr1Q8K2I2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Cchcr1Q8K2I2 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Cchcr1Q8K2I2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Cchcr1Q8K2I2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Cchcr1Q8K2I2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Cchcr1Q8K2I2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
Cchcr1Q8K2I2 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Cchcr1Q8K2I2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
Cchcr1Q8K2I2 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Cchcr1Q8K2I2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Cchcr1Q8K2I2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
Cchcr1Q8K2I2 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Cchcr1Q8K2I2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Cchcr1Q8K2I2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
Cchcr1Q8K2I2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Cchcr1Q8K2I2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Cchcr1Q8K2I2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Cchcr1Q8K2I2 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
Cchcr1Q8K2I2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Cchcr1Q8K2I2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
Cchcr1Q8K2I2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC25.58■■□□□ 1.69
Cchcr1Q8K2I2 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
Cchcr1Q8K2I2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Cchcr1Q8K2I2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
Cchcr1Q8K2I2 Dmtn-209ENSMUST00000228295 2572 ntBASIC25.58■■□□□ 1.69
Cchcr1Q8K2I2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Cchcr1Q8K2I2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Cchcr1Q8K2I2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Cchcr1Q8K2I2 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
Cchcr1Q8K2I2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Cchcr1Q8K2I2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Cchcr1Q8K2I2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Cchcr1Q8K2I2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Cchcr1Q8K2I2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms