Protein–RNA interactions for Protein: Q8K1X4

Nckap1l, Nck-associated protein 1-like, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1lQ8K1X4 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Nckap1lQ8K1X4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.08■□□□□ 0.96
Nckap1lQ8K1X4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.08■□□□□ 0.96
Nckap1lQ8K1X4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nckap1lQ8K1X4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nckap1lQ8K1X4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Nckap1lQ8K1X4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Nckap1lQ8K1X4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Nckap1lQ8K1X4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nckap1lQ8K1X4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nckap1lQ8K1X4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nckap1lQ8K1X4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nckap1lQ8K1X4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Nckap1lQ8K1X4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nckap1lQ8K1X4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Nckap1lQ8K1X4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Nckap1lQ8K1X4 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nckap1lQ8K1X4 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nckap1lQ8K1X4 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nckap1lQ8K1X4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nckap1lQ8K1X4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Nckap1lQ8K1X4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.06■□□□□ 0.96
Nckap1lQ8K1X4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Nckap1lQ8K1X4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Nckap1lQ8K1X4 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nckap1lQ8K1X4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Nckap1lQ8K1X4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.05■□□□□ 0.96
Nckap1lQ8K1X4 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nckap1lQ8K1X4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Nckap1lQ8K1X4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Nckap1lQ8K1X4 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nckap1lQ8K1X4 Gm11687-201ENSMUST00000118911 886 ntBASIC21.04■□□□□ 0.96
Nckap1lQ8K1X4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nckap1lQ8K1X4 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.03■□□□□ 0.96
Nckap1lQ8K1X4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nckap1lQ8K1X4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nckap1lQ8K1X4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nckap1lQ8K1X4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nckap1lQ8K1X4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nckap1lQ8K1X4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nckap1lQ8K1X4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nckap1lQ8K1X4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Nckap1lQ8K1X4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Nckap1lQ8K1X4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nckap1lQ8K1X4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.01■□□□□ 0.95
Nckap1lQ8K1X4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.01■□□□□ 0.95
Nckap1lQ8K1X4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
Nckap1lQ8K1X4 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.01■□□□□ 0.95
Nckap1lQ8K1X4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.01■□□□□ 0.95
Nckap1lQ8K1X4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Nckap1lQ8K1X4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.01■□□□□ 0.95
Nckap1lQ8K1X4 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.01■□□□□ 0.95
Nckap1lQ8K1X4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Nckap1lQ8K1X4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nckap1lQ8K1X4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nckap1lQ8K1X4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
Nckap1lQ8K1X4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Nckap1lQ8K1X4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nckap1lQ8K1X4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nckap1lQ8K1X4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nckap1lQ8K1X4 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nckap1lQ8K1X4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nckap1lQ8K1X4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.98■□□□□ 0.95
Nckap1lQ8K1X4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.98■□□□□ 0.95
Nckap1lQ8K1X4 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nckap1lQ8K1X4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nckap1lQ8K1X4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nckap1lQ8K1X4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
Nckap1lQ8K1X4 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nckap1lQ8K1X4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.96■□□□□ 0.95
Nckap1lQ8K1X4 Gm44428-201ENSMUST00000204474 874 ntBASIC20.96■□□□□ 0.95
Nckap1lQ8K1X4 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nckap1lQ8K1X4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nckap1lQ8K1X4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nckap1lQ8K1X4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nckap1lQ8K1X4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nckap1lQ8K1X4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nckap1lQ8K1X4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nckap1lQ8K1X4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.95■□□□□ 0.94
Nckap1lQ8K1X4 Gm11175-201ENSMUST00000116172 543 ntBASIC20.94■□□□□ 0.94
Nckap1lQ8K1X4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nckap1lQ8K1X4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nckap1lQ8K1X4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nckap1lQ8K1X4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nckap1lQ8K1X4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Nckap1lQ8K1X4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Nckap1lQ8K1X4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nckap1lQ8K1X4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Nckap1lQ8K1X4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.93■□□□□ 0.94
Nckap1lQ8K1X4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nckap1lQ8K1X4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Nckap1lQ8K1X4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nckap1lQ8K1X4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Nckap1lQ8K1X4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.92■□□□□ 0.94
Nckap1lQ8K1X4 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Nckap1lQ8K1X4 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nckap1lQ8K1X4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.92■□□□□ 0.94
Nckap1lQ8K1X4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nckap1lQ8K1X4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nckap1lQ8K1X4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms