Protein–RNA interactions for Protein: Q8C7E9

Cstf2t, Cleavage stimulation factor subunit 2 tau variant, mousemouse

Known RBP Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf2tQ8C7E9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cstf2tQ8C7E9 Gm22238-201ENSMUST00000175222 88 ntBASIC22.26■■□□□ 1.15
Cstf2tQ8C7E9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC22.26■■□□□ 1.15
Cstf2tQ8C7E9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Cstf2tQ8C7E9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cstf2tQ8C7E9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cstf2tQ8C7E9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cstf2tQ8C7E9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.25■■□□□ 1.15
Cstf2tQ8C7E9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cstf2tQ8C7E9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC22.25■■□□□ 1.15
Cstf2tQ8C7E9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cstf2tQ8C7E9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Cstf2tQ8C7E9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cstf2tQ8C7E9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cstf2tQ8C7E9 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cstf2tQ8C7E9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cstf2tQ8C7E9 Gm8495-201ENSMUST00000188740 694 ntBASIC22.24■■□□□ 1.15
Cstf2tQ8C7E9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Cstf2tQ8C7E9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cstf2tQ8C7E9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cstf2tQ8C7E9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cstf2tQ8C7E9 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.22■■□□□ 1.15
Cstf2tQ8C7E9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Cstf2tQ8C7E9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Cstf2tQ8C7E9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.22■■□□□ 1.15
Cstf2tQ8C7E9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cstf2tQ8C7E9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cstf2tQ8C7E9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Cstf2tQ8C7E9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cstf2tQ8C7E9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Cstf2tQ8C7E9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cstf2tQ8C7E9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cstf2tQ8C7E9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Cstf2tQ8C7E9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cstf2tQ8C7E9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cstf2tQ8C7E9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cstf2tQ8C7E9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cstf2tQ8C7E9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cstf2tQ8C7E9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cstf2tQ8C7E9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Cstf2tQ8C7E9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Cstf2tQ8C7E9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cstf2tQ8C7E9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Cstf2tQ8C7E9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC22.19■■□□□ 1.14
Cstf2tQ8C7E9 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cstf2tQ8C7E9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.18■■□□□ 1.14
Cstf2tQ8C7E9 Gm12821-201ENSMUST00000120022 600 ntBASIC22.18■■□□□ 1.14
Cstf2tQ8C7E9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cstf2tQ8C7E9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.18■■□□□ 1.14
Cstf2tQ8C7E9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cstf2tQ8C7E9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cstf2tQ8C7E9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cstf2tQ8C7E9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Cstf2tQ8C7E9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cstf2tQ8C7E9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cstf2tQ8C7E9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Cstf2tQ8C7E9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC22.17■■□□□ 1.14
Cstf2tQ8C7E9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC22.17■■□□□ 1.14
Cstf2tQ8C7E9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Cstf2tQ8C7E9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.17■■□□□ 1.14
Cstf2tQ8C7E9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cstf2tQ8C7E9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC22.16■■□□□ 1.14
Cstf2tQ8C7E9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Cstf2tQ8C7E9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cstf2tQ8C7E9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Cstf2tQ8C7E9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cstf2tQ8C7E9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cstf2tQ8C7E9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cstf2tQ8C7E9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Cstf2tQ8C7E9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Cstf2tQ8C7E9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.14
Cstf2tQ8C7E9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cstf2tQ8C7E9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Cstf2tQ8C7E9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC22.14■■□□□ 1.13
Cstf2tQ8C7E9 Gm18284-201ENSMUST00000172604 624 ntBASIC22.14■■□□□ 1.13
Cstf2tQ8C7E9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Cstf2tQ8C7E9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cstf2tQ8C7E9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Cstf2tQ8C7E9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Cstf2tQ8C7E9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC22.13■■□□□ 1.13
Cstf2tQ8C7E9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Cstf2tQ8C7E9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cstf2tQ8C7E9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cstf2tQ8C7E9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
Cstf2tQ8C7E9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cstf2tQ8C7E9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC22.12■■□□□ 1.13
Cstf2tQ8C7E9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.12■■□□□ 1.13
Cstf2tQ8C7E9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
Cstf2tQ8C7E9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.11■■□□□ 1.13
Cstf2tQ8C7E9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC22.11■■□□□ 1.13
Cstf2tQ8C7E9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Cstf2tQ8C7E9 Spcs1-207ENSMUST00000228767 1008 ntBASIC22.11■■□□□ 1.13
Cstf2tQ8C7E9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Cstf2tQ8C7E9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cstf2tQ8C7E9 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Cstf2tQ8C7E9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cstf2tQ8C7E9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cstf2tQ8C7E9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cstf2tQ8C7E9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cstf2tQ8C7E9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms