Protein–RNA interactions for Protein: Q8C5U0

4933409G03Rik, RIKEN cDNA 4933409G03 gene, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933409G03RikQ8C5U0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
4933409G03RikQ8C5U0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
4933409G03RikQ8C5U0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
4933409G03RikQ8C5U0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
4933409G03RikQ8C5U0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
4933409G03RikQ8C5U0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC23.77■■□□□ 1.4
4933409G03RikQ8C5U0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
4933409G03RikQ8C5U0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
4933409G03RikQ8C5U0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
4933409G03RikQ8C5U0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
4933409G03RikQ8C5U0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
4933409G03RikQ8C5U0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.76■■□□□ 1.39
4933409G03RikQ8C5U0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
4933409G03RikQ8C5U0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
4933409G03RikQ8C5U0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC23.76■■□□□ 1.39
4933409G03RikQ8C5U0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
4933409G03RikQ8C5U0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
4933409G03RikQ8C5U0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
4933409G03RikQ8C5U0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
4933409G03RikQ8C5U0 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
4933409G03RikQ8C5U0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC23.75■■□□□ 1.39
4933409G03RikQ8C5U0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
4933409G03RikQ8C5U0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
4933409G03RikQ8C5U0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
4933409G03RikQ8C5U0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC23.74■■□□□ 1.39
4933409G03RikQ8C5U0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
4933409G03RikQ8C5U0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
4933409G03RikQ8C5U0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
4933409G03RikQ8C5U0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC23.73■■□□□ 1.39
4933409G03RikQ8C5U0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC23.73■■□□□ 1.39
4933409G03RikQ8C5U0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC23.73■■□□□ 1.39
4933409G03RikQ8C5U0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
4933409G03RikQ8C5U0 Gm28536-201ENSMUST00000190971 1317 ntBASIC23.73■■□□□ 1.39
4933409G03RikQ8C5U0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
4933409G03RikQ8C5U0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
4933409G03RikQ8C5U0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
4933409G03RikQ8C5U0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
4933409G03RikQ8C5U0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
4933409G03RikQ8C5U0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC23.72■■□□□ 1.39
4933409G03RikQ8C5U0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC23.72■■□□□ 1.39
4933409G03RikQ8C5U0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.72■■□□□ 1.39
4933409G03RikQ8C5U0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
4933409G03RikQ8C5U0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
4933409G03RikQ8C5U0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
4933409G03RikQ8C5U0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC23.71■■□□□ 1.39
4933409G03RikQ8C5U0 Gm28731-201ENSMUST00000185564 1569 ntBASIC23.71■■□□□ 1.39
4933409G03RikQ8C5U0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
4933409G03RikQ8C5U0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
4933409G03RikQ8C5U0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
4933409G03RikQ8C5U0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC23.71■■□□□ 1.39
4933409G03RikQ8C5U0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
4933409G03RikQ8C5U0 Gm5131-201ENSMUST00000212776 1238 ntBASIC23.7■■□□□ 1.38
4933409G03RikQ8C5U0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
4933409G03RikQ8C5U0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
4933409G03RikQ8C5U0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
4933409G03RikQ8C5U0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
4933409G03RikQ8C5U0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
4933409G03RikQ8C5U0 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
4933409G03RikQ8C5U0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
4933409G03RikQ8C5U0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
4933409G03RikQ8C5U0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
4933409G03RikQ8C5U0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC23.67■■□□□ 1.38
4933409G03RikQ8C5U0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC23.67■■□□□ 1.38
4933409G03RikQ8C5U0 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
4933409G03RikQ8C5U0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
4933409G03RikQ8C5U0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
4933409G03RikQ8C5U0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
4933409G03RikQ8C5U0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
4933409G03RikQ8C5U0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
4933409G03RikQ8C5U0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
4933409G03RikQ8C5U0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
4933409G03RikQ8C5U0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
4933409G03RikQ8C5U0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
4933409G03RikQ8C5U0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
4933409G03RikQ8C5U0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
4933409G03RikQ8C5U0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC23.65■■□□□ 1.38
4933409G03RikQ8C5U0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
4933409G03RikQ8C5U0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC23.65■■□□□ 1.38
4933409G03RikQ8C5U0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
4933409G03RikQ8C5U0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
4933409G03RikQ8C5U0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
4933409G03RikQ8C5U0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
4933409G03RikQ8C5U0 Gm7417-201ENSMUST00000192950 473 ntBASIC23.64■■□□□ 1.37
4933409G03RikQ8C5U0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC23.64■■□□□ 1.37
4933409G03RikQ8C5U0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
4933409G03RikQ8C5U0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC23.63■■□□□ 1.37
4933409G03RikQ8C5U0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC23.63■■□□□ 1.37
4933409G03RikQ8C5U0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
4933409G03RikQ8C5U0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
4933409G03RikQ8C5U0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
4933409G03RikQ8C5U0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
4933409G03RikQ8C5U0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC23.62■■□□□ 1.37
4933409G03RikQ8C5U0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC23.62■■□□□ 1.37
4933409G03RikQ8C5U0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC23.62■■□□□ 1.37
4933409G03RikQ8C5U0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
4933409G03RikQ8C5U0 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
4933409G03RikQ8C5U0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
4933409G03RikQ8C5U0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
4933409G03RikQ8C5U0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
4933409G03RikQ8C5U0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms