Protein–RNA interactions for Protein: Q8C3X2

Ccdc90b, Coiled-coil domain-containing protein 90B, mitochondrial, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc90bQ8C3X2 Gm42809-201ENSMUST00000198429 1138 ntBASIC21■□□□□ 0.95
Ccdc90bQ8C3X2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Ccdc90bQ8C3X2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21■□□□□ 0.95
Ccdc90bQ8C3X2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc90bQ8C3X2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21■□□□□ 0.95
Ccdc90bQ8C3X2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc90bQ8C3X2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc90bQ8C3X2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc90bQ8C3X2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc90bQ8C3X2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc90bQ8C3X2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc90bQ8C3X2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc90bQ8C3X2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc90bQ8C3X2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc90bQ8C3X2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc90bQ8C3X2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc90bQ8C3X2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc90bQ8C3X2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.98■□□□□ 0.95
Ccdc90bQ8C3X2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc90bQ8C3X2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc90bQ8C3X2 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Ccdc90bQ8C3X2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc90bQ8C3X2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc90bQ8C3X2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc90bQ8C3X2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc90bQ8C3X2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc90bQ8C3X2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc90bQ8C3X2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Ccdc90bQ8C3X2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Ccdc90bQ8C3X2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.96■□□□□ 0.95
Ccdc90bQ8C3X2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc90bQ8C3X2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc90bQ8C3X2 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc90bQ8C3X2 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc90bQ8C3X2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc90bQ8C3X2 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.94■□□□□ 0.94
Ccdc90bQ8C3X2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc90bQ8C3X2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc90bQ8C3X2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
Ccdc90bQ8C3X2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc90bQ8C3X2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc90bQ8C3X2 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc90bQ8C3X2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc90bQ8C3X2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc90bQ8C3X2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc90bQ8C3X2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Ccdc90bQ8C3X2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ccdc90bQ8C3X2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc90bQ8C3X2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc90bQ8C3X2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc90bQ8C3X2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.92■□□□□ 0.94
Ccdc90bQ8C3X2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Ccdc90bQ8C3X2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc90bQ8C3X2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc90bQ8C3X2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.92■□□□□ 0.94
Ccdc90bQ8C3X2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Ccdc90bQ8C3X2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Ccdc90bQ8C3X2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc90bQ8C3X2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc90bQ8C3X2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc90bQ8C3X2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc90bQ8C3X2 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc90bQ8C3X2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc90bQ8C3X2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc90bQ8C3X2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ccdc90bQ8C3X2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc90bQ8C3X2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc90bQ8C3X2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Ccdc90bQ8C3X2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc90bQ8C3X2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
Ccdc90bQ8C3X2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc90bQ8C3X2 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc90bQ8C3X2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc90bQ8C3X2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.88■□□□□ 0.93
Ccdc90bQ8C3X2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc90bQ8C3X2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc90bQ8C3X2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.87■□□□□ 0.93
Ccdc90bQ8C3X2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc90bQ8C3X2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc90bQ8C3X2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc90bQ8C3X2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Ccdc90bQ8C3X2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.86■□□□□ 0.93
Ccdc90bQ8C3X2 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.86■□□□□ 0.93
Ccdc90bQ8C3X2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc90bQ8C3X2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.86■□□□□ 0.93
Ccdc90bQ8C3X2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Ccdc90bQ8C3X2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.85■□□□□ 0.93
Ccdc90bQ8C3X2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.85■□□□□ 0.93
Ccdc90bQ8C3X2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc90bQ8C3X2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc90bQ8C3X2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc90bQ8C3X2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc90bQ8C3X2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc90bQ8C3X2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc90bQ8C3X2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.84■□□□□ 0.93
Ccdc90bQ8C3X2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Ccdc90bQ8C3X2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Ccdc90bQ8C3X2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc90bQ8C3X2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc90bQ8C3X2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms