Protein–RNA interactions for Protein: Q8BGA5

Krr1, KRR1 small subunit processome component homolog, mousemouse

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krr1Q8BGA5 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Krr1Q8BGA5 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Krr1Q8BGA5 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Krr1Q8BGA5 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.44■□□□□ 0.86
Krr1Q8BGA5 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Krr1Q8BGA5 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Krr1Q8BGA5 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Krr1Q8BGA5 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Krr1Q8BGA5 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Krr1Q8BGA5 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Krr1Q8BGA5 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
Krr1Q8BGA5 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.42■□□□□ 0.86
Krr1Q8BGA5 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Krr1Q8BGA5 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Krr1Q8BGA5 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Krr1Q8BGA5 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Krr1Q8BGA5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Krr1Q8BGA5 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Krr1Q8BGA5 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Krr1Q8BGA5 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.41■□□□□ 0.86
Krr1Q8BGA5 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Krr1Q8BGA5 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.4■□□□□ 0.86
Krr1Q8BGA5 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Krr1Q8BGA5 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Krr1Q8BGA5 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Krr1Q8BGA5 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Krr1Q8BGA5 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Krr1Q8BGA5 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Krr1Q8BGA5 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Krr1Q8BGA5 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Krr1Q8BGA5 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Krr1Q8BGA5 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.39■□□□□ 0.85
Krr1Q8BGA5 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.39■□□□□ 0.85
Krr1Q8BGA5 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Krr1Q8BGA5 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Krr1Q8BGA5 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Krr1Q8BGA5 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.39■□□□□ 0.85
Krr1Q8BGA5 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Krr1Q8BGA5 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.38■□□□□ 0.85
Krr1Q8BGA5 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Krr1Q8BGA5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Krr1Q8BGA5 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Krr1Q8BGA5 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.38■□□□□ 0.85
Krr1Q8BGA5 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Krr1Q8BGA5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Krr1Q8BGA5 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.38■□□□□ 0.85
Krr1Q8BGA5 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Krr1Q8BGA5 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Krr1Q8BGA5 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.37■□□□□ 0.85
Krr1Q8BGA5 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.37■□□□□ 0.85
Krr1Q8BGA5 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Krr1Q8BGA5 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Krr1Q8BGA5 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Krr1Q8BGA5 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.37■□□□□ 0.85
Krr1Q8BGA5 Terc-201ENSMUST00000082862 423 ntBASIC20.37■□□□□ 0.85
Krr1Q8BGA5 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.36■□□□□ 0.85
Krr1Q8BGA5 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.36■□□□□ 0.85
Krr1Q8BGA5 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Krr1Q8BGA5 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.36■□□□□ 0.85
Krr1Q8BGA5 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Krr1Q8BGA5 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Krr1Q8BGA5 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.35■□□□□ 0.85
Krr1Q8BGA5 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Krr1Q8BGA5 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Krr1Q8BGA5 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Krr1Q8BGA5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Krr1Q8BGA5 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Krr1Q8BGA5 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Krr1Q8BGA5 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Krr1Q8BGA5 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Krr1Q8BGA5 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Krr1Q8BGA5 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Krr1Q8BGA5 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.33■□□□□ 0.85
Krr1Q8BGA5 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.33■□□□□ 0.85
Krr1Q8BGA5 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Krr1Q8BGA5 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Krr1Q8BGA5 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Krr1Q8BGA5 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Krr1Q8BGA5 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Krr1Q8BGA5 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Krr1Q8BGA5 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Krr1Q8BGA5 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.31■□□□□ 0.84
Krr1Q8BGA5 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.31■□□□□ 0.84
Krr1Q8BGA5 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Krr1Q8BGA5 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Krr1Q8BGA5 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Krr1Q8BGA5 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Krr1Q8BGA5 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Krr1Q8BGA5 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Krr1Q8BGA5 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Krr1Q8BGA5 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.3■□□□□ 0.84
Krr1Q8BGA5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Krr1Q8BGA5 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Krr1Q8BGA5 Gm6311-201ENSMUST00000073790 878 ntBASIC20.3■□□□□ 0.84
Krr1Q8BGA5 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Krr1Q8BGA5 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Krr1Q8BGA5 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Krr1Q8BGA5 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Krr1Q8BGA5 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Krr1Q8BGA5 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms