Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lrrtm4Q80XG9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lrrtm4Q80XG9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrrtm4Q80XG9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.26■□□□□ 0.99
Lrrtm4Q80XG9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Lrrtm4Q80XG9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrrtm4Q80XG9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrrtm4Q80XG9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrrtm4Q80XG9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrrtm4Q80XG9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lrrtm4Q80XG9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Lrrtm4Q80XG9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrrtm4Q80XG9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrrtm4Q80XG9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lrrtm4Q80XG9 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lrrtm4Q80XG9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Lrrtm4Q80XG9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lrrtm4Q80XG9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lrrtm4Q80XG9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.24■□□□□ 0.99
Lrrtm4Q80XG9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
Lrrtm4Q80XG9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lrrtm4Q80XG9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Lrrtm4Q80XG9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lrrtm4Q80XG9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lrrtm4Q80XG9 Gm43566-201ENSMUST00000196851 808 ntBASIC21.22■□□□□ 0.99
Lrrtm4Q80XG9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lrrtm4Q80XG9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lrrtm4Q80XG9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Lrrtm4Q80XG9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Lrrtm4Q80XG9 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lrrtm4Q80XG9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.21■□□□□ 0.99
Lrrtm4Q80XG9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lrrtm4Q80XG9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.21■□□□□ 0.99
Lrrtm4Q80XG9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Lrrtm4Q80XG9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Lrrtm4Q80XG9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Lrrtm4Q80XG9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Lrrtm4Q80XG9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lrrtm4Q80XG9 Gm13238-201ENSMUST00000117655 780 ntBASIC21.2■□□□□ 0.98
Lrrtm4Q80XG9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.2■□□□□ 0.98
Lrrtm4Q80XG9 Gm22567-201ENSMUST00000175542 342 ntBASIC21.2■□□□□ 0.98
Lrrtm4Q80XG9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Lrrtm4Q80XG9 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrrtm4Q80XG9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrrtm4Q80XG9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Lrrtm4Q80XG9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Lrrtm4Q80XG9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrrtm4Q80XG9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Lrrtm4Q80XG9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lrrtm4Q80XG9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Lrrtm4Q80XG9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.18■□□□□ 0.98
Lrrtm4Q80XG9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.18■□□□□ 0.98
Lrrtm4Q80XG9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrrtm4Q80XG9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lrrtm4Q80XG9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lrrtm4Q80XG9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrrtm4Q80XG9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrrtm4Q80XG9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Lrrtm4Q80XG9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrrtm4Q80XG9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lrrtm4Q80XG9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lrrtm4Q80XG9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lrrtm4Q80XG9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lrrtm4Q80XG9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.16■□□□□ 0.98
Lrrtm4Q80XG9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Lrrtm4Q80XG9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lrrtm4Q80XG9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrrtm4Q80XG9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrrtm4Q80XG9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrrtm4Q80XG9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lrrtm4Q80XG9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lrrtm4Q80XG9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrrtm4Q80XG9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrrtm4Q80XG9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Lrrtm4Q80XG9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Lrrtm4Q80XG9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Lrrtm4Q80XG9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Lrrtm4Q80XG9 Gm5812-201ENSMUST00000061073 957 ntBASIC21.14■□□□□ 0.97
Lrrtm4Q80XG9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lrrtm4Q80XG9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lrrtm4Q80XG9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lrrtm4Q80XG9 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.13■□□□□ 0.97
Lrrtm4Q80XG9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.13■□□□□ 0.97
Lrrtm4Q80XG9 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.13■□□□□ 0.97
Lrrtm4Q80XG9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
Lrrtm4Q80XG9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Lrrtm4Q80XG9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lrrtm4Q80XG9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.12■□□□□ 0.97
Lrrtm4Q80XG9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lrrtm4Q80XG9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
Lrrtm4Q80XG9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Lrrtm4Q80XG9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lrrtm4Q80XG9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.11■□□□□ 0.97
Lrrtm4Q80XG9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lrrtm4Q80XG9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lrrtm4Q80XG9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lrrtm4Q80XG9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Lrrtm4Q80XG9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.11■□□□□ 0.97
Lrrtm4Q80XG9 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lrrtm4Q80XG9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms