Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Vrk1Q80X41 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Vrk1Q80X41 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vrk1Q80X41 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vrk1Q80X41 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vrk1Q80X41 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vrk1Q80X41 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.77■□□□□ 0.92
Vrk1Q80X41 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Vrk1Q80X41 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vrk1Q80X41 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.77■□□□□ 0.91
Vrk1Q80X41 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Vrk1Q80X41 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.76■□□□□ 0.91
Vrk1Q80X41 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Vrk1Q80X41 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Vrk1Q80X41 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vrk1Q80X41 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vrk1Q80X41 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.75■□□□□ 0.91
Vrk1Q80X41 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
Vrk1Q80X41 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Vrk1Q80X41 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Vrk1Q80X41 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.75■□□□□ 0.91
Vrk1Q80X41 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vrk1Q80X41 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.74■□□□□ 0.91
Vrk1Q80X41 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vrk1Q80X41 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vrk1Q80X41 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Vrk1Q80X41 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vrk1Q80X41 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Vrk1Q80X41 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vrk1Q80X41 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.73■□□□□ 0.91
Vrk1Q80X41 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vrk1Q80X41 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Vrk1Q80X41 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vrk1Q80X41 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vrk1Q80X41 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Vrk1Q80X41 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.72■□□□□ 0.91
Vrk1Q80X41 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vrk1Q80X41 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.72■□□□□ 0.91
Vrk1Q80X41 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vrk1Q80X41 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.72■□□□□ 0.91
Vrk1Q80X41 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.72■□□□□ 0.91
Vrk1Q80X41 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.71■□□□□ 0.91
Vrk1Q80X41 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vrk1Q80X41 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.71■□□□□ 0.91
Vrk1Q80X41 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.71■□□□□ 0.91
Vrk1Q80X41 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.71■□□□□ 0.91
Vrk1Q80X41 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.71■□□□□ 0.91
Vrk1Q80X41 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
Vrk1Q80X41 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.7■□□□□ 0.91
Vrk1Q80X41 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vrk1Q80X41 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vrk1Q80X41 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Vrk1Q80X41 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Vrk1Q80X41 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.7■□□□□ 0.9
Vrk1Q80X41 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.7■□□□□ 0.9
Vrk1Q80X41 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vrk1Q80X41 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Vrk1Q80X41 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vrk1Q80X41 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vrk1Q80X41 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Vrk1Q80X41 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vrk1Q80X41 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vrk1Q80X41 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Vrk1Q80X41 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.69■□□□□ 0.9
Vrk1Q80X41 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.69■□□□□ 0.9
Vrk1Q80X41 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vrk1Q80X41 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Vrk1Q80X41 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Vrk1Q80X41 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vrk1Q80X41 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vrk1Q80X41 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.68■□□□□ 0.9
Vrk1Q80X41 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vrk1Q80X41 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vrk1Q80X41 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vrk1Q80X41 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vrk1Q80X41 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.67■□□□□ 0.9
Vrk1Q80X41 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vrk1Q80X41 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.67■□□□□ 0.9
Vrk1Q80X41 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vrk1Q80X41 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vrk1Q80X41 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Vrk1Q80X41 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vrk1Q80X41 Gm7417-201ENSMUST00000192950 473 ntBASIC20.66■□□□□ 0.9
Vrk1Q80X41 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.66■□□□□ 0.9
Vrk1Q80X41 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Vrk1Q80X41 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vrk1Q80X41 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vrk1Q80X41 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vrk1Q80X41 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vrk1Q80X41 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vrk1Q80X41 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vrk1Q80X41 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.65■□□□□ 0.9
Vrk1Q80X41 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vrk1Q80X41 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vrk1Q80X41 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vrk1Q80X41 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vrk1Q80X41 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vrk1Q80X41 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.64■□□□□ 0.89
Vrk1Q80X41 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Vrk1Q80X41 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms