Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trim62Q80V85 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trim62Q80V85 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trim62Q80V85 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trim62Q80V85 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trim62Q80V85 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC22.59■■□□□ 1.21
Trim62Q80V85 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.59■■□□□ 1.21
Trim62Q80V85 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trim62Q80V85 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trim62Q80V85 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Trim62Q80V85 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.58■■□□□ 1.21
Trim62Q80V85 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Trim62Q80V85 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
Trim62Q80V85 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Trim62Q80V85 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.57■■□□□ 1.2
Trim62Q80V85 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trim62Q80V85 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC22.57■■□□□ 1.2
Trim62Q80V85 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Trim62Q80V85 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.56■■□□□ 1.2
Trim62Q80V85 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trim62Q80V85 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trim62Q80V85 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trim62Q80V85 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Trim62Q80V85 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Trim62Q80V85 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim62Q80V85 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.55■■□□□ 1.2
Trim62Q80V85 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim62Q80V85 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Trim62Q80V85 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim62Q80V85 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Trim62Q80V85 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trim62Q80V85 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trim62Q80V85 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trim62Q80V85 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trim62Q80V85 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trim62Q80V85 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Trim62Q80V85 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.54■■□□□ 1.2
Trim62Q80V85 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trim62Q80V85 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trim62Q80V85 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trim62Q80V85 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trim62Q80V85 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trim62Q80V85 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Trim62Q80V85 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trim62Q80V85 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Trim62Q80V85 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.53■■□□□ 1.2
Trim62Q80V85 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Trim62Q80V85 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trim62Q80V85 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Trim62Q80V85 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trim62Q80V85 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Trim62Q80V85 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trim62Q80V85 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Trim62Q80V85 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Trim62Q80V85 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.52■■□□□ 1.2
Trim62Q80V85 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trim62Q80V85 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
Trim62Q80V85 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC22.52■■□□□ 1.2
Trim62Q80V85 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Trim62Q80V85 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim62Q80V85 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Trim62Q80V85 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim62Q80V85 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim62Q80V85 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.51■■□□□ 1.19
Trim62Q80V85 Gm45444-201ENSMUST00000211394 898 ntBASIC22.51■■□□□ 1.19
Trim62Q80V85 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim62Q80V85 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim62Q80V85 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Trim62Q80V85 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trim62Q80V85 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.5■■□□□ 1.19
Trim62Q80V85 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trim62Q80V85 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Trim62Q80V85 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trim62Q80V85 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trim62Q80V85 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim62Q80V85 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim62Q80V85 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Trim62Q80V85 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Trim62Q80V85 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Trim62Q80V85 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Trim62Q80V85 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Trim62Q80V85 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim62Q80V85 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.47■■□□□ 1.19
Trim62Q80V85 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim62Q80V85 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim62Q80V85 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Trim62Q80V85 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim62Q80V85 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim62Q80V85 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim62Q80V85 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim62Q80V85 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim62Q80V85 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim62Q80V85 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Trim62Q80V85 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Trim62Q80V85 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
Trim62Q80V85 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim62Q80V85 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Trim62Q80V85 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim62Q80V85 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Trim62Q80V85 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms