Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Cd47Q61735 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cd47Q61735 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cd47Q61735 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cd47Q61735 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cd47Q61735 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Cd47Q61735 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cd47Q61735 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Cd47Q61735 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cd47Q61735 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cd47Q61735 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cd47Q61735 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cd47Q61735 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cd47Q61735 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cd47Q61735 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
Cd47Q61735 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cd47Q61735 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cd47Q61735 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cd47Q61735 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cd47Q61735 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cd47Q61735 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.69■□□□□ 0.74
Cd47Q61735 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cd47Q61735 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cd47Q61735 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cd47Q61735 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Cd47Q61735 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.69■□□□□ 0.74
Cd47Q61735 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
Cd47Q61735 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cd47Q61735 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.68■□□□□ 0.74
Cd47Q61735 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cd47Q61735 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cd47Q61735 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cd47Q61735 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cd47Q61735 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.67■□□□□ 0.74
Cd47Q61735 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cd47Q61735 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.67■□□□□ 0.74
Cd47Q61735 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cd47Q61735 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cd47Q61735 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cd47Q61735 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cd47Q61735 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cd47Q61735 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cd47Q61735 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cd47Q61735 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cd47Q61735 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Cd47Q61735 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cd47Q61735 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.64■□□□□ 0.74
Cd47Q61735 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cd47Q61735 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cd47Q61735 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.64■□□□□ 0.73
Cd47Q61735 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cd47Q61735 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cd47Q61735 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cd47Q61735 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cd47Q61735 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cd47Q61735 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd47Q61735 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cd47Q61735 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.63■□□□□ 0.73
Cd47Q61735 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cd47Q61735 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd47Q61735 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd47Q61735 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.62■□□□□ 0.73
Cd47Q61735 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd47Q61735 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.62■□□□□ 0.73
Cd47Q61735 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd47Q61735 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cd47Q61735 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd47Q61735 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd47Q61735 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.61■□□□□ 0.73
Cd47Q61735 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cd47Q61735 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.61■□□□□ 0.73
Cd47Q61735 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Cd47Q61735 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cd47Q61735 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
Cd47Q61735 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Cd47Q61735 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cd47Q61735 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cd47Q61735 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Cd47Q61735 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cd47Q61735 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cd47Q61735 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cd47Q61735 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cd47Q61735 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Cd47Q61735 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cd47Q61735 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.59■□□□□ 0.73
Cd47Q61735 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.59■□□□□ 0.73
Cd47Q61735 Scarna2-201ENSMUST00000157560 414 ntBASIC19.59■□□□□ 0.73
Cd47Q61735 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.59■□□□□ 0.73
Cd47Q61735 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Cd47Q61735 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cd47Q61735 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cd47Q61735 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cd47Q61735 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cd47Q61735 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Cd47Q61735 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cd47Q61735 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cd47Q61735 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cd47Q61735 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cd47Q61735 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.57■□□□□ 0.72
Cd47Q61735 Gm44428-201ENSMUST00000204474 874 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms