Protein–RNA interactions for Protein: Q61500

Itm2a, Integral membrane protein 2A, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itm2aQ61500 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Itm2aQ61500 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.4■■□□□ 1.02
Itm2aQ61500 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Itm2aQ61500 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Itm2aQ61500 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Itm2aQ61500 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Itm2aQ61500 Gm22567-201ENSMUST00000175542 342 ntBASIC21.39■■□□□ 1.01
Itm2aQ61500 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Itm2aQ61500 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.39■■□□□ 1.01
Itm2aQ61500 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Itm2aQ61500 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Itm2aQ61500 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Itm2aQ61500 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Itm2aQ61500 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Itm2aQ61500 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Itm2aQ61500 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Itm2aQ61500 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Itm2aQ61500 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Itm2aQ61500 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Itm2aQ61500 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Itm2aQ61500 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Itm2aQ61500 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Itm2aQ61500 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Itm2aQ61500 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Itm2aQ61500 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Itm2aQ61500 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Itm2aQ61500 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.37■■□□□ 1.01
Itm2aQ61500 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Itm2aQ61500 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.37■■□□□ 1.01
Itm2aQ61500 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Itm2aQ61500 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.36■■□□□ 1.01
Itm2aQ61500 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Itm2aQ61500 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Itm2aQ61500 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.36■■□□□ 1.01
Itm2aQ61500 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Itm2aQ61500 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Itm2aQ61500 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Itm2aQ61500 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Itm2aQ61500 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Itm2aQ61500 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.34■■□□□ 1.01
Itm2aQ61500 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.34■■□□□ 1.01
Itm2aQ61500 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Itm2aQ61500 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Itm2aQ61500 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Itm2aQ61500 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Itm2aQ61500 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Itm2aQ61500 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.33■■□□□ 1.01
Itm2aQ61500 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.33■■□□□ 1.01
Itm2aQ61500 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.33■■□□□ 1
Itm2aQ61500 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.33■■□□□ 1
Itm2aQ61500 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Itm2aQ61500 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Itm2aQ61500 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Itm2aQ61500 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.32■■□□□ 1
Itm2aQ61500 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Itm2aQ61500 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.32■■□□□ 1
Itm2aQ61500 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Itm2aQ61500 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Itm2aQ61500 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Itm2aQ61500 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.31■■□□□ 1
Itm2aQ61500 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Itm2aQ61500 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Itm2aQ61500 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.31■■□□□ 1
Itm2aQ61500 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.31■■□□□ 1
Itm2aQ61500 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Itm2aQ61500 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Itm2aQ61500 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Itm2aQ61500 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Itm2aQ61500 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.3■■□□□ 1
Itm2aQ61500 Mir3960-201ENSMUST00000198213 73 ntBASIC21.3■■□□□ 1
Itm2aQ61500 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.3■■□□□ 1
Itm2aQ61500 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.3■■□□□ 1
Itm2aQ61500 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Itm2aQ61500 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Itm2aQ61500 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Itm2aQ61500 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Itm2aQ61500 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Itm2aQ61500 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Itm2aQ61500 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Itm2aQ61500 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Itm2aQ61500 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.29■■□□□ 1
Itm2aQ61500 Gm45364-201ENSMUST00000210883 159 ntBASIC21.29■■□□□ 1
Itm2aQ61500 Terc-201ENSMUST00000082862 423 ntBASIC21.29■■□□□ 1
Itm2aQ61500 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Itm2aQ61500 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Itm2aQ61500 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.29■■□□□ 1
Itm2aQ61500 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Itm2aQ61500 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.28■■□□□ 1
Itm2aQ61500 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.28■■□□□ 1
Itm2aQ61500 Gm8503-201ENSMUST00000118131 455 ntBASIC21.28■■□□□ 1
Itm2aQ61500 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Itm2aQ61500 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Itm2aQ61500 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.28■■□□□ 1
Itm2aQ61500 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Itm2aQ61500 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Itm2aQ61500 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.27■■□□□ 1
Itm2aQ61500 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Itm2aQ61500 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Itm2aQ61500 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Itm2aQ61500 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms