Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Col27a1Q5QNQ9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col27a1Q5QNQ9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Col27a1Q5QNQ9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Col27a1Q5QNQ9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col27a1Q5QNQ9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col27a1Q5QNQ9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.87■■□□□ 1.09
Col27a1Q5QNQ9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Col27a1Q5QNQ9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Col27a1Q5QNQ9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col27a1Q5QNQ9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Col27a1Q5QNQ9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col27a1Q5QNQ9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.86■■□□□ 1.09
Col27a1Q5QNQ9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.85■■□□□ 1.09
Col27a1Q5QNQ9 Golgb1-201ENSMUST00000023534 498 ntBASIC21.85■■□□□ 1.09
Col27a1Q5QNQ9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Col27a1Q5QNQ9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col27a1Q5QNQ9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col27a1Q5QNQ9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.85■■□□□ 1.09
Col27a1Q5QNQ9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Col27a1Q5QNQ9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Col27a1Q5QNQ9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col27a1Q5QNQ9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.84■■□□□ 1.09
Col27a1Q5QNQ9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col27a1Q5QNQ9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col27a1Q5QNQ9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col27a1Q5QNQ9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Col27a1Q5QNQ9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col27a1Q5QNQ9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col27a1Q5QNQ9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Col27a1Q5QNQ9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Col27a1Q5QNQ9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Col27a1Q5QNQ9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Col27a1Q5QNQ9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col27a1Q5QNQ9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Col27a1Q5QNQ9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col27a1Q5QNQ9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Col27a1Q5QNQ9 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col27a1Q5QNQ9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col27a1Q5QNQ9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col27a1Q5QNQ9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Col27a1Q5QNQ9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Col27a1Q5QNQ9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Col27a1Q5QNQ9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.8■■□□□ 1.08
Col27a1Q5QNQ9 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Col27a1Q5QNQ9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col27a1Q5QNQ9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Col27a1Q5QNQ9 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.79■■□□□ 1.08
Col27a1Q5QNQ9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col27a1Q5QNQ9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.78■■□□□ 1.08
Col27a1Q5QNQ9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.78■■□□□ 1.08
Col27a1Q5QNQ9 Gm8495-201ENSMUST00000188740 694 ntBASIC21.78■■□□□ 1.08
Col27a1Q5QNQ9 Gm29257-201ENSMUST00000186115 639 ntBASIC21.78■■□□□ 1.08
Col27a1Q5QNQ9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col27a1Q5QNQ9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.78■■□□□ 1.08
Col27a1Q5QNQ9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col27a1Q5QNQ9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col27a1Q5QNQ9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Col27a1Q5QNQ9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col27a1Q5QNQ9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col27a1Q5QNQ9 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.76■■□□□ 1.07
Col27a1Q5QNQ9 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.76■■□□□ 1.07
Col27a1Q5QNQ9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Col27a1Q5QNQ9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col27a1Q5QNQ9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col27a1Q5QNQ9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
Col27a1Q5QNQ9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col27a1Q5QNQ9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col27a1Q5QNQ9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.75■■□□□ 1.07
Col27a1Q5QNQ9 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.75■■□□□ 1.07
Col27a1Q5QNQ9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col27a1Q5QNQ9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.75■■□□□ 1.07
Col27a1Q5QNQ9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col27a1Q5QNQ9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col27a1Q5QNQ9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Col27a1Q5QNQ9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.74■■□□□ 1.07
Col27a1Q5QNQ9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col27a1Q5QNQ9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col27a1Q5QNQ9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.73■■□□□ 1.07
Col27a1Q5QNQ9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Col27a1Q5QNQ9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col27a1Q5QNQ9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col27a1Q5QNQ9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Col27a1Q5QNQ9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col27a1Q5QNQ9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col27a1Q5QNQ9 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col27a1Q5QNQ9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col27a1Q5QNQ9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col27a1Q5QNQ9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col27a1Q5QNQ9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Col27a1Q5QNQ9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col27a1Q5QNQ9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.72■■□□□ 1.07
Col27a1Q5QNQ9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Col27a1Q5QNQ9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col27a1Q5QNQ9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Col27a1Q5QNQ9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Col27a1Q5QNQ9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.71■■□□□ 1.07
Col27a1Q5QNQ9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Col27a1Q5QNQ9 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.71■■□□□ 1.07
Col27a1Q5QNQ9 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms