Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Znf48Q3US17 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Znf48Q3US17 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Znf48Q3US17 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Znf48Q3US17 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Znf48Q3US17 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Znf48Q3US17 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Znf48Q3US17 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Znf48Q3US17 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.7■□□□□ 0.42
Znf48Q3US17 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.7■□□□□ 0.42
Znf48Q3US17 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.7■□□□□ 0.42
Znf48Q3US17 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Znf48Q3US17 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Znf48Q3US17 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.7■□□□□ 0.42
Znf48Q3US17 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Znf48Q3US17 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Znf48Q3US17 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Znf48Q3US17 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Znf48Q3US17 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Znf48Q3US17 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Znf48Q3US17 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Znf48Q3US17 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Znf48Q3US17 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.69■□□□□ 0.42
Znf48Q3US17 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Znf48Q3US17 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Znf48Q3US17 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Znf48Q3US17 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Znf48Q3US17 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Znf48Q3US17 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Znf48Q3US17 Gm13238-201ENSMUST00000117655 780 ntBASIC17.68■□□□□ 0.42
Znf48Q3US17 Gm14117-201ENSMUST00000122417 843 ntBASIC17.68■□□□□ 0.42
Znf48Q3US17 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Znf48Q3US17 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Znf48Q3US17 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.68■□□□□ 0.42
Znf48Q3US17 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Znf48Q3US17 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Znf48Q3US17 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Znf48Q3US17 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Znf48Q3US17 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Znf48Q3US17 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Znf48Q3US17 Gm45102-201ENSMUST00000207427 857 ntBASIC17.67■□□□□ 0.42
Znf48Q3US17 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Znf48Q3US17 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.67■□□□□ 0.42
Znf48Q3US17 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Znf48Q3US17 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Znf48Q3US17 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Znf48Q3US17 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Znf48Q3US17 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Znf48Q3US17 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Znf48Q3US17 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Znf48Q3US17 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.66■□□□□ 0.42
Znf48Q3US17 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Znf48Q3US17 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Znf48Q3US17 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.66■□□□□ 0.42
Znf48Q3US17 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.66■□□□□ 0.42
Znf48Q3US17 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Znf48Q3US17 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Znf48Q3US17 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Znf48Q3US17 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Znf48Q3US17 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Znf48Q3US17 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Znf48Q3US17 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Znf48Q3US17 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.65■□□□□ 0.42
Znf48Q3US17 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Znf48Q3US17 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Znf48Q3US17 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Znf48Q3US17 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Znf48Q3US17 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Znf48Q3US17 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Znf48Q3US17 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Znf48Q3US17 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Znf48Q3US17 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Znf48Q3US17 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Znf48Q3US17 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Znf48Q3US17 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Znf48Q3US17 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Znf48Q3US17 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Znf48Q3US17 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Znf48Q3US17 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Znf48Q3US17 Gm43566-201ENSMUST00000196851 808 ntBASIC17.64■□□□□ 0.41
Znf48Q3US17 Gm44428-201ENSMUST00000204474 874 ntBASIC17.64■□□□□ 0.41
Znf48Q3US17 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Znf48Q3US17 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Znf48Q3US17 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.64■□□□□ 0.41
Znf48Q3US17 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Znf48Q3US17 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Znf48Q3US17 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Znf48Q3US17 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Znf48Q3US17 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Znf48Q3US17 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Znf48Q3US17 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Znf48Q3US17 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Znf48Q3US17 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Znf48Q3US17 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Znf48Q3US17 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Znf48Q3US17 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.62■□□□□ 0.41
Znf48Q3US17 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Znf48Q3US17 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Znf48Q3US17 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Znf48Q3US17 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms