Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf44Q3UHJ8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.03■□□□□ 0.96
Rnf44Q3UHJ8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf44Q3UHJ8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf44Q3UHJ8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf44Q3UHJ8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf44Q3UHJ8 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf44Q3UHJ8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.02■□□□□ 0.96
Rnf44Q3UHJ8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
Rnf44Q3UHJ8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Rnf44Q3UHJ8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf44Q3UHJ8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.02■□□□□ 0.96
Rnf44Q3UHJ8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Rnf44Q3UHJ8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf44Q3UHJ8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf44Q3UHJ8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Rnf44Q3UHJ8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf44Q3UHJ8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21■□□□□ 0.95
Rnf44Q3UHJ8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf44Q3UHJ8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf44Q3UHJ8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf44Q3UHJ8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.99■□□□□ 0.95
Rnf44Q3UHJ8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf44Q3UHJ8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf44Q3UHJ8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Rnf44Q3UHJ8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf44Q3UHJ8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf44Q3UHJ8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf44Q3UHJ8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf44Q3UHJ8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf44Q3UHJ8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf44Q3UHJ8 Gm22567-201ENSMUST00000175542 342 ntBASIC20.98■□□□□ 0.95
Rnf44Q3UHJ8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf44Q3UHJ8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.98■□□□□ 0.95
Rnf44Q3UHJ8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf44Q3UHJ8 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf44Q3UHJ8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Rnf44Q3UHJ8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf44Q3UHJ8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf44Q3UHJ8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.96■□□□□ 0.95
Rnf44Q3UHJ8 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.96■□□□□ 0.95
Rnf44Q3UHJ8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf44Q3UHJ8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf44Q3UHJ8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf44Q3UHJ8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.95■□□□□ 0.95
Rnf44Q3UHJ8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf44Q3UHJ8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf44Q3UHJ8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf44Q3UHJ8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Rnf44Q3UHJ8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf44Q3UHJ8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.95■□□□□ 0.94
Rnf44Q3UHJ8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Rnf44Q3UHJ8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf44Q3UHJ8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.94■□□□□ 0.94
Rnf44Q3UHJ8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf44Q3UHJ8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf44Q3UHJ8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Rnf44Q3UHJ8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.94■□□□□ 0.94
Rnf44Q3UHJ8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf44Q3UHJ8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.93■□□□□ 0.94
Rnf44Q3UHJ8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf44Q3UHJ8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf44Q3UHJ8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf44Q3UHJ8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Rnf44Q3UHJ8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Rnf44Q3UHJ8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf44Q3UHJ8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf44Q3UHJ8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf44Q3UHJ8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.92■□□□□ 0.94
Rnf44Q3UHJ8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.92■□□□□ 0.94
Rnf44Q3UHJ8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf44Q3UHJ8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf44Q3UHJ8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.91■□□□□ 0.94
Rnf44Q3UHJ8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf44Q3UHJ8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf44Q3UHJ8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf44Q3UHJ8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnf44Q3UHJ8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf44Q3UHJ8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf44Q3UHJ8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf44Q3UHJ8 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf44Q3UHJ8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rnf44Q3UHJ8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rnf44Q3UHJ8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf44Q3UHJ8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf44Q3UHJ8 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf44Q3UHJ8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Rnf44Q3UHJ8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Rnf44Q3UHJ8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf44Q3UHJ8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Rnf44Q3UHJ8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf44Q3UHJ8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf44Q3UHJ8 Gm5921-201ENSMUST00000075898 882 ntBASIC20.88■□□□□ 0.93
Rnf44Q3UHJ8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf44Q3UHJ8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf44Q3UHJ8 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf44Q3UHJ8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Rnf44Q3UHJ8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf44Q3UHJ8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf44Q3UHJ8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms