Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Brf2Q3UAW9 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
Brf2Q3UAW9 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Brf2Q3UAW9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Brf2Q3UAW9 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Brf2Q3UAW9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Brf2Q3UAW9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Brf2Q3UAW9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Brf2Q3UAW9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Brf2Q3UAW9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.42■□□□□ 0.86
Brf2Q3UAW9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Brf2Q3UAW9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Brf2Q3UAW9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Brf2Q3UAW9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.42■□□□□ 0.86
Brf2Q3UAW9 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.42■□□□□ 0.86
Brf2Q3UAW9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.42■□□□□ 0.86
Brf2Q3UAW9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
Brf2Q3UAW9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.41■□□□□ 0.86
Brf2Q3UAW9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Brf2Q3UAW9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Brf2Q3UAW9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Brf2Q3UAW9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Brf2Q3UAW9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Brf2Q3UAW9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Brf2Q3UAW9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Brf2Q3UAW9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Brf2Q3UAW9 Gm11175-201ENSMUST00000116172 543 ntBASIC20.4■□□□□ 0.86
Brf2Q3UAW9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Brf2Q3UAW9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Brf2Q3UAW9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Brf2Q3UAW9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Brf2Q3UAW9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.4■□□□□ 0.86
Brf2Q3UAW9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Brf2Q3UAW9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Brf2Q3UAW9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Brf2Q3UAW9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Brf2Q3UAW9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Brf2Q3UAW9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Brf2Q3UAW9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Brf2Q3UAW9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Brf2Q3UAW9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Brf2Q3UAW9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Brf2Q3UAW9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Brf2Q3UAW9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Brf2Q3UAW9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.38■□□□□ 0.85
Brf2Q3UAW9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Brf2Q3UAW9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Brf2Q3UAW9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Brf2Q3UAW9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Brf2Q3UAW9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Brf2Q3UAW9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Brf2Q3UAW9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Brf2Q3UAW9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Brf2Q3UAW9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Brf2Q3UAW9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Brf2Q3UAW9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Brf2Q3UAW9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Brf2Q3UAW9 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Brf2Q3UAW9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Brf2Q3UAW9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Brf2Q3UAW9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Brf2Q3UAW9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Brf2Q3UAW9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.36■□□□□ 0.85
Brf2Q3UAW9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Brf2Q3UAW9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Brf2Q3UAW9 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Brf2Q3UAW9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Brf2Q3UAW9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Brf2Q3UAW9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Brf2Q3UAW9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.35■□□□□ 0.85
Brf2Q3UAW9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Brf2Q3UAW9 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Brf2Q3UAW9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Brf2Q3UAW9 Gm27502-201ENSMUST00000183495 199 ntBASIC20.34■□□□□ 0.85
Brf2Q3UAW9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Brf2Q3UAW9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Brf2Q3UAW9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Brf2Q3UAW9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Brf2Q3UAW9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Brf2Q3UAW9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Brf2Q3UAW9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Brf2Q3UAW9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.33■□□□□ 0.85
Brf2Q3UAW9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Brf2Q3UAW9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Brf2Q3UAW9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.33■□□□□ 0.85
Brf2Q3UAW9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Brf2Q3UAW9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.33■□□□□ 0.84
Brf2Q3UAW9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.33■□□□□ 0.84
Brf2Q3UAW9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Brf2Q3UAW9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Brf2Q3UAW9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Brf2Q3UAW9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.32■□□□□ 0.84
Brf2Q3UAW9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Brf2Q3UAW9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Brf2Q3UAW9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Brf2Q3UAW9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Brf2Q3UAW9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Brf2Q3UAW9 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Brf2Q3UAW9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Brf2Q3UAW9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms