Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cln6Q3U466 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cln6Q3U466 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cln6Q3U466 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cln6Q3U466 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cln6Q3U466 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cln6Q3U466 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cln6Q3U466 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cln6Q3U466 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cln6Q3U466 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.42■□□□□ 0.54
Cln6Q3U466 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cln6Q3U466 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cln6Q3U466 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cln6Q3U466 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cln6Q3U466 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cln6Q3U466 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cln6Q3U466 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cln6Q3U466 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cln6Q3U466 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cln6Q3U466 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cln6Q3U466 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cln6Q3U466 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cln6Q3U466 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cln6Q3U466 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cln6Q3U466 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cln6Q3U466 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cln6Q3U466 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cln6Q3U466 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.4■□□□□ 0.54
Cln6Q3U466 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cln6Q3U466 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cln6Q3U466 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cln6Q3U466 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.39■□□□□ 0.54
Cln6Q3U466 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cln6Q3U466 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Cln6Q3U466 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cln6Q3U466 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cln6Q3U466 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cln6Q3U466 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Cln6Q3U466 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.39■□□□□ 0.53
Cln6Q3U466 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cln6Q3U466 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cln6Q3U466 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.38■□□□□ 0.53
Cln6Q3U466 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cln6Q3U466 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cln6Q3U466 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cln6Q3U466 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cln6Q3U466 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cln6Q3U466 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cln6Q3U466 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cln6Q3U466 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cln6Q3U466 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cln6Q3U466 Mir3960-201ENSMUST00000198213 73 ntBASIC18.37■□□□□ 0.53
Cln6Q3U466 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cln6Q3U466 Gm9812-201ENSMUST00000061934 968 ntBASIC18.37■□□□□ 0.53
Cln6Q3U466 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cln6Q3U466 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cln6Q3U466 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cln6Q3U466 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.37■□□□□ 0.53
Cln6Q3U466 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cln6Q3U466 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cln6Q3U466 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cln6Q3U466 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.36■□□□□ 0.53
Cln6Q3U466 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cln6Q3U466 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cln6Q3U466 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cln6Q3U466 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cln6Q3U466 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cln6Q3U466 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cln6Q3U466 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Cln6Q3U466 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cln6Q3U466 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.34■□□□□ 0.53
Cln6Q3U466 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cln6Q3U466 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cln6Q3U466 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.34■□□□□ 0.53
Cln6Q3U466 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.33■□□□□ 0.53
Cln6Q3U466 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.33■□□□□ 0.53
Cln6Q3U466 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Cln6Q3U466 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
Cln6Q3U466 Gm7432-201ENSMUST00000210343 879 ntBASIC18.33■□□□□ 0.52
Cln6Q3U466 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Cln6Q3U466 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.33■□□□□ 0.52
Cln6Q3U466 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cln6Q3U466 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cln6Q3U466 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.33■□□□□ 0.52
Cln6Q3U466 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cln6Q3U466 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cln6Q3U466 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cln6Q3U466 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.32■□□□□ 0.52
Cln6Q3U466 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.32■□□□□ 0.52
Cln6Q3U466 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cln6Q3U466 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.31■□□□□ 0.52
Cln6Q3U466 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cln6Q3U466 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cln6Q3U466 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cln6Q3U466 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cln6Q3U466 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cln6Q3U466 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cln6Q3U466 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cln6Q3U466 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cln6Q3U466 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms