Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp25Q3U435 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp25Q3U435 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Mmp25Q3U435 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp25Q3U435 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Mmp25Q3U435 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Mmp25Q3U435 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp25Q3U435 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Mmp25Q3U435 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.52■□□□□ 0.88
Mmp25Q3U435 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp25Q3U435 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
Mmp25Q3U435 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Mmp25Q3U435 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Mmp25Q3U435 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp25Q3U435 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.51■□□□□ 0.87
Mmp25Q3U435 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp25Q3U435 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp25Q3U435 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp25Q3U435 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp25Q3U435 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp25Q3U435 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp25Q3U435 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.5■□□□□ 0.87
Mmp25Q3U435 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.5■□□□□ 0.87
Mmp25Q3U435 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.5■□□□□ 0.87
Mmp25Q3U435 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Mmp25Q3U435 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.5■□□□□ 0.87
Mmp25Q3U435 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.5■□□□□ 0.87
Mmp25Q3U435 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp25Q3U435 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp25Q3U435 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp25Q3U435 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp25Q3U435 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp25Q3U435 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp25Q3U435 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.49■□□□□ 0.87
Mmp25Q3U435 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp25Q3U435 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp25Q3U435 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.48■□□□□ 0.87
Mmp25Q3U435 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp25Q3U435 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp25Q3U435 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp25Q3U435 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.48■□□□□ 0.87
Mmp25Q3U435 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp25Q3U435 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp25Q3U435 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp25Q3U435 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.47■□□□□ 0.87
Mmp25Q3U435 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp25Q3U435 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp25Q3U435 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp25Q3U435 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp25Q3U435 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp25Q3U435 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.46■□□□□ 0.87
Mmp25Q3U435 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.46■□□□□ 0.87
Mmp25Q3U435 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp25Q3U435 Gm45444-201ENSMUST00000211394 898 ntBASIC20.46■□□□□ 0.87
Mmp25Q3U435 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp25Q3U435 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp25Q3U435 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp25Q3U435 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp25Q3U435 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp25Q3U435 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.45■□□□□ 0.86
Mmp25Q3U435 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp25Q3U435 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.45■□□□□ 0.86
Mmp25Q3U435 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Mmp25Q3U435 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp25Q3U435 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp25Q3U435 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.44■□□□□ 0.86
Mmp25Q3U435 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Mmp25Q3U435 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Mmp25Q3U435 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Mmp25Q3U435 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Mmp25Q3U435 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mmp25Q3U435 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mmp25Q3U435 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mmp25Q3U435 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mmp25Q3U435 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Mmp25Q3U435 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mmp25Q3U435 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Mmp25Q3U435 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Mmp25Q3U435 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Mmp25Q3U435 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mmp25Q3U435 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Mmp25Q3U435 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mmp25Q3U435 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Mmp25Q3U435 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Mmp25Q3U435 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mmp25Q3U435 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mmp25Q3U435 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Mmp25Q3U435 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Mmp25Q3U435 Gm43566-201ENSMUST00000196851 808 ntBASIC20.41■□□□□ 0.86
Mmp25Q3U435 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Mmp25Q3U435 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp25Q3U435 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp25Q3U435 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp25Q3U435 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp25Q3U435 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp25Q3U435 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp25Q3U435 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp25Q3U435 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp25Q3U435 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Mmp25Q3U435 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms