Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vbp1P61759 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vbp1P61759 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
Vbp1P61759 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vbp1P61759 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Vbp1P61759 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vbp1P61759 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.74■□□□□ 0.75
Vbp1P61759 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vbp1P61759 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vbp1P61759 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.74■□□□□ 0.75
Vbp1P61759 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vbp1P61759 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Vbp1P61759 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vbp1P61759 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vbp1P61759 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.73■□□□□ 0.75
Vbp1P61759 Gm24804-201ENSMUST00000174982 85 ntBASIC19.73■□□□□ 0.75
Vbp1P61759 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.73■□□□□ 0.75
Vbp1P61759 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vbp1P61759 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vbp1P61759 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vbp1P61759 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vbp1P61759 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vbp1P61759 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Vbp1P61759 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Vbp1P61759 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Vbp1P61759 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vbp1P61759 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.71■□□□□ 0.75
Vbp1P61759 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vbp1P61759 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.71■□□□□ 0.75
Vbp1P61759 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vbp1P61759 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vbp1P61759 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vbp1P61759 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vbp1P61759 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Vbp1P61759 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vbp1P61759 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vbp1P61759 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vbp1P61759 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vbp1P61759 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vbp1P61759 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vbp1P61759 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vbp1P61759 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vbp1P61759 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Vbp1P61759 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Vbp1P61759 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vbp1P61759 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vbp1P61759 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Vbp1P61759 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.69■□□□□ 0.74
Vbp1P61759 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vbp1P61759 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vbp1P61759 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vbp1P61759 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vbp1P61759 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vbp1P61759 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vbp1P61759 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vbp1P61759 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vbp1P61759 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vbp1P61759 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vbp1P61759 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vbp1P61759 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vbp1P61759 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vbp1P61759 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.67■□□□□ 0.74
Vbp1P61759 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vbp1P61759 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vbp1P61759 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vbp1P61759 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Vbp1P61759 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.65■□□□□ 0.74
Vbp1P61759 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.65■□□□□ 0.74
Vbp1P61759 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Vbp1P61759 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vbp1P61759 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Vbp1P61759 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vbp1P61759 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.65■□□□□ 0.74
Vbp1P61759 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vbp1P61759 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vbp1P61759 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vbp1P61759 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Vbp1P61759 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vbp1P61759 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vbp1P61759 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vbp1P61759 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vbp1P61759 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vbp1P61759 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Vbp1P61759 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vbp1P61759 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Vbp1P61759 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Vbp1P61759 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vbp1P61759 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vbp1P61759 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vbp1P61759 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vbp1P61759 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.62■□□□□ 0.73
Vbp1P61759 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Vbp1P61759 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vbp1P61759 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vbp1P61759 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vbp1P61759 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vbp1P61759 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vbp1P61759 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.61■□□□□ 0.73
Vbp1P61759 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.61■□□□□ 0.73
Vbp1P61759 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 1612 ms