Protein–RNA interactions for Protein: P56564

Slc1a3, Excitatory amino acid transporter 1, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a3P56564 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc1a3P56564 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc1a3P56564 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.48■□□□□ 0.71
Slc1a3P56564 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc1a3P56564 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc1a3P56564 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.48■□□□□ 0.71
Slc1a3P56564 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc1a3P56564 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Slc1a3P56564 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Slc1a3P56564 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Slc1a3P56564 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.48■□□□□ 0.71
Slc1a3P56564 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc1a3P56564 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc1a3P56564 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.47■□□□□ 0.71
Slc1a3P56564 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc1a3P56564 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc1a3P56564 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Slc1a3P56564 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc1a3P56564 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.46■□□□□ 0.71
Slc1a3P56564 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc1a3P56564 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.46■□□□□ 0.71
Slc1a3P56564 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Slc1a3P56564 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc1a3P56564 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Slc1a3P56564 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Slc1a3P56564 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Slc1a3P56564 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.45■□□□□ 0.7
Slc1a3P56564 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Slc1a3P56564 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc1a3P56564 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc1a3P56564 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.43■□□□□ 0.7
Slc1a3P56564 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc1a3P56564 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc1a3P56564 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc1a3P56564 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.43■□□□□ 0.7
Slc1a3P56564 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.43■□□□□ 0.7
Slc1a3P56564 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc1a3P56564 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc1a3P56564 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc1a3P56564 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc1a3P56564 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc1a3P56564 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.43■□□□□ 0.7
Slc1a3P56564 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc1a3P56564 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.42■□□□□ 0.7
Slc1a3P56564 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slc1a3P56564 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.42■□□□□ 0.7
Slc1a3P56564 Gm9812-201ENSMUST00000061934 968 ntBASIC19.42■□□□□ 0.7
Slc1a3P56564 Gm4799-201ENSMUST00000095396 657 ntBASIC19.42■□□□□ 0.7
Slc1a3P56564 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc1a3P56564 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Slc1a3P56564 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Slc1a3P56564 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc1a3P56564 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.41■□□□□ 0.7
Slc1a3P56564 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Slc1a3P56564 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.41■□□□□ 0.7
Slc1a3P56564 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc1a3P56564 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.4■□□□□ 0.7
Slc1a3P56564 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc1a3P56564 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc1a3P56564 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc1a3P56564 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.4■□□□□ 0.7
Slc1a3P56564 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc1a3P56564 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Slc1a3P56564 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Slc1a3P56564 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.39■□□□□ 0.7
Slc1a3P56564 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Slc1a3P56564 Gm6821-201ENSMUST00000107540 542 ntBASIC19.39■□□□□ 0.69
Slc1a3P56564 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.39■□□□□ 0.69
Slc1a3P56564 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.39■□□□□ 0.69
Slc1a3P56564 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc1a3P56564 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc1a3P56564 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc1a3P56564 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc1a3P56564 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc1a3P56564 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc1a3P56564 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Slc1a3P56564 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Slc1a3P56564 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Slc1a3P56564 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Slc1a3P56564 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Slc1a3P56564 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc1a3P56564 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc1a3P56564 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc1a3P56564 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Slc1a3P56564 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Slc1a3P56564 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.37■□□□□ 0.69
Slc1a3P56564 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc1a3P56564 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
Slc1a3P56564 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Slc1a3P56564 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slc1a3P56564 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Slc1a3P56564 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc1a3P56564 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Slc1a3P56564 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc1a3P56564 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc1a3P56564 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slc1a3P56564 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Slc1a3P56564 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
Slc1a3P56564 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.36■□□□□ 0.69
Slc1a3P56564 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms