Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Abcd3P55096 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.47■□□□□ 0.71
Abcd3P55096 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Abcd3P55096 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Abcd3P55096 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Abcd3P55096 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Abcd3P55096 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.46■□□□□ 0.71
Abcd3P55096 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.46■□□□□ 0.71
Abcd3P55096 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Abcd3P55096 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.46■□□□□ 0.71
Abcd3P55096 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Abcd3P55096 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Abcd3P55096 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Abcd3P55096 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Abcd3P55096 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Abcd3P55096 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Abcd3P55096 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Abcd3P55096 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Abcd3P55096 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Abcd3P55096 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Abcd3P55096 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Abcd3P55096 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abcd3P55096 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abcd3P55096 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Abcd3P55096 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Abcd3P55096 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Abcd3P55096 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Abcd3P55096 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Abcd3P55096 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Abcd3P55096 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Abcd3P55096 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Abcd3P55096 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Abcd3P55096 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abcd3P55096 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Abcd3P55096 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.41■□□□□ 0.7
Abcd3P55096 Gm27502-201ENSMUST00000183495 199 ntBASIC19.41■□□□□ 0.7
Abcd3P55096 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abcd3P55096 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abcd3P55096 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Abcd3P55096 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Abcd3P55096 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Abcd3P55096 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.4■□□□□ 0.7
Abcd3P55096 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Abcd3P55096 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Abcd3P55096 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.4■□□□□ 0.7
Abcd3P55096 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Abcd3P55096 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Abcd3P55096 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Abcd3P55096 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.4■□□□□ 0.7
Abcd3P55096 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Abcd3P55096 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Abcd3P55096 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Abcd3P55096 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Abcd3P55096 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Abcd3P55096 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abcd3P55096 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abcd3P55096 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.38■□□□□ 0.69
Abcd3P55096 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.38■□□□□ 0.69
Abcd3P55096 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abcd3P55096 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Abcd3P55096 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abcd3P55096 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abcd3P55096 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abcd3P55096 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Abcd3P55096 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Abcd3P55096 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Abcd3P55096 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Abcd3P55096 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Abcd3P55096 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Abcd3P55096 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.37■□□□□ 0.69
Abcd3P55096 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Abcd3P55096 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.37■□□□□ 0.69
Abcd3P55096 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Abcd3P55096 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Abcd3P55096 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Abcd3P55096 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.36■□□□□ 0.69
Abcd3P55096 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Abcd3P55096 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Abcd3P55096 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.36■□□□□ 0.69
Abcd3P55096 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.36■□□□□ 0.69
Abcd3P55096 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Abcd3P55096 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Abcd3P55096 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcd3P55096 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcd3P55096 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcd3P55096 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcd3P55096 Gm14523-201ENSMUST00000117260 558 ntBASIC19.35■□□□□ 0.69
Abcd3P55096 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcd3P55096 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcd3P55096 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcd3P55096 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcd3P55096 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcd3P55096 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Abcd3P55096 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Abcd3P55096 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.34■□□□□ 0.69
Abcd3P55096 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Abcd3P55096 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Abcd3P55096 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.34■□□□□ 0.69
Abcd3P55096 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Abcd3P55096 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 162.5 ms