Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sox5P35710 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sox5P35710 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sox5P35710 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sox5P35710 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sox5P35710 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sox5P35710 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sox5P35710 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Sox5P35710 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.8■■□□□ 1.4
Sox5P35710 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC23.8■■□□□ 1.4
Sox5P35710 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.8■■□□□ 1.4
Sox5P35710 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sox5P35710 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sox5P35710 AC117245.4-201ENSMUST00000217388 1646 ntBASIC23.8■■□□□ 1.4
Sox5P35710 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sox5P35710 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Sox5P35710 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Sox5P35710 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Sox5P35710 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Sox5P35710 Gm38160-201ENSMUST00000193090 2499 ntBASIC23.78■■□□□ 1.4
Sox5P35710 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Sox5P35710 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Sox5P35710 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Sox5P35710 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Sox5P35710 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Sox5P35710 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Sox5P35710 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Sox5P35710 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Sox5P35710 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.77■■□□□ 1.4
Sox5P35710 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Sox5P35710 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
Sox5P35710 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
Sox5P35710 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sox5P35710 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.76■■□□□ 1.39
Sox5P35710 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Sox5P35710 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.76■■□□□ 1.39
Sox5P35710 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sox5P35710 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Sox5P35710 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Sox5P35710 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Sox5P35710 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Sox5P35710 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
Sox5P35710 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Sox5P35710 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.74■■□□□ 1.39
Sox5P35710 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Sox5P35710 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sox5P35710 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.74■■□□□ 1.39
Sox5P35710 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Sox5P35710 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sox5P35710 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sox5P35710 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sox5P35710 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sox5P35710 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sox5P35710 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sox5P35710 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sox5P35710 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Sox5P35710 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Sox5P35710 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Sox5P35710 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Sox5P35710 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC23.72■■□□□ 1.39
Sox5P35710 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Sox5P35710 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Sox5P35710 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Sox5P35710 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.71■■□□□ 1.39
Sox5P35710 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Sox5P35710 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Sox5P35710 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Sox5P35710 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Sox5P35710 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Sox5P35710 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Sox5P35710 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Sox5P35710 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
Sox5P35710 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Sox5P35710 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC23.69■■□□□ 1.38
Sox5P35710 Gm37415-201ENSMUST00000192265 2054 ntBASIC23.69■■□□□ 1.38
Sox5P35710 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Sox5P35710 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Sox5P35710 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC23.68■■□□□ 1.38
Sox5P35710 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC23.68■■□□□ 1.38
Sox5P35710 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC23.68■■□□□ 1.38
Sox5P35710 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Sox5P35710 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Sox5P35710 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC23.67■■□□□ 1.38
Sox5P35710 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Sox5P35710 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Sox5P35710 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Sox5P35710 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC23.66■■□□□ 1.38
Sox5P35710 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.65■■□□□ 1.38
Sox5P35710 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Sox5P35710 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Sox5P35710 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Sox5P35710 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.65■■□□□ 1.38
Sox5P35710 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.65■■□□□ 1.38
Sox5P35710 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Sox5P35710 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Sox5P35710 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Sox5P35710 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Sox5P35710 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
Sox5P35710 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Sox5P35710 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms