Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RetP35546 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RetP35546 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RetP35546 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RetP35546 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RetP35546 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RetP35546 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RetP35546 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RetP35546 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RetP35546 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RetP35546 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RetP35546 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
RetP35546 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.27■□□□□ 0.84
RetP35546 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.27■□□□□ 0.84
RetP35546 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RetP35546 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.27■□□□□ 0.84
RetP35546 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.27■□□□□ 0.84
RetP35546 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.26■□□□□ 0.83
RetP35546 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RetP35546 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RetP35546 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
RetP35546 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RetP35546 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.26■□□□□ 0.83
RetP35546 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RetP35546 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RetP35546 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RetP35546 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RetP35546 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RetP35546 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RetP35546 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RetP35546 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RetP35546 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RetP35546 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.25■□□□□ 0.83
RetP35546 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RetP35546 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RetP35546 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RetP35546 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RetP35546 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.25■□□□□ 0.83
RetP35546 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RetP35546 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RetP35546 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RetP35546 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RetP35546 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RetP35546 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RetP35546 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RetP35546 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.24■□□□□ 0.83
RetP35546 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RetP35546 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RetP35546 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RetP35546 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RetP35546 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RetP35546 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
RetP35546 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RetP35546 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RetP35546 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.22■□□□□ 0.83
RetP35546 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.22■□□□□ 0.83
RetP35546 Gm43566-201ENSMUST00000196851 808 ntBASIC20.22■□□□□ 0.83
RetP35546 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RetP35546 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.21■□□□□ 0.83
RetP35546 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.21■□□□□ 0.83
RetP35546 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.21■□□□□ 0.83
RetP35546 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
RetP35546 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
RetP35546 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RetP35546 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RetP35546 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RetP35546 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.2■□□□□ 0.82
RetP35546 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RetP35546 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RetP35546 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RetP35546 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RetP35546 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RetP35546 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RetP35546 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RetP35546 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RetP35546 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
RetP35546 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RetP35546 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.19■□□□□ 0.82
RetP35546 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RetP35546 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RetP35546 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RetP35546 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RetP35546 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RetP35546 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RetP35546 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
RetP35546 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RetP35546 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RetP35546 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RetP35546 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.17■□□□□ 0.82
RetP35546 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.17■□□□□ 0.82
RetP35546 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
RetP35546 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RetP35546 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RetP35546 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RetP35546 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RetP35546 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RetP35546 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RetP35546 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RetP35546 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RetP35546 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms