Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cd40lgP27548 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cd40lgP27548 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cd40lgP27548 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cd40lgP27548 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Cd40lgP27548 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cd40lgP27548 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cd40lgP27548 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cd40lgP27548 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Cd40lgP27548 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Cd40lgP27548 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cd40lgP27548 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Cd40lgP27548 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cd40lgP27548 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Cd40lgP27548 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cd40lgP27548 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cd40lgP27548 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cd40lgP27548 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cd40lgP27548 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.85■□□□□ 0.77
Cd40lgP27548 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cd40lgP27548 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Cd40lgP27548 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cd40lgP27548 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Cd40lgP27548 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Cd40lgP27548 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cd40lgP27548 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.84■□□□□ 0.77
Cd40lgP27548 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Cd40lgP27548 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cd40lgP27548 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cd40lgP27548 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cd40lgP27548 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cd40lgP27548 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cd40lgP27548 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cd40lgP27548 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cd40lgP27548 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cd40lgP27548 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cd40lgP27548 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cd40lgP27548 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cd40lgP27548 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Cd40lgP27548 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cd40lgP27548 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cd40lgP27548 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Cd40lgP27548 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cd40lgP27548 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.82■□□□□ 0.76
Cd40lgP27548 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Cd40lgP27548 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cd40lgP27548 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cd40lgP27548 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cd40lgP27548 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cd40lgP27548 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cd40lgP27548 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Cd40lgP27548 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cd40lgP27548 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cd40lgP27548 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cd40lgP27548 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Cd40lgP27548 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cd40lgP27548 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cd40lgP27548 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Cd40lgP27548 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cd40lgP27548 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Cd40lgP27548 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cd40lgP27548 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cd40lgP27548 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cd40lgP27548 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.78■□□□□ 0.76
Cd40lgP27548 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cd40lgP27548 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cd40lgP27548 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
Cd40lgP27548 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cd40lgP27548 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Cd40lgP27548 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cd40lgP27548 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cd40lgP27548 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cd40lgP27548 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.76■□□□□ 0.75
Cd40lgP27548 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cd40lgP27548 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.76■□□□□ 0.75
Cd40lgP27548 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cd40lgP27548 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cd40lgP27548 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cd40lgP27548 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cd40lgP27548 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.75■□□□□ 0.75
Cd40lgP27548 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cd40lgP27548 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cd40lgP27548 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cd40lgP27548 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cd40lgP27548 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cd40lgP27548 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cd40lgP27548 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cd40lgP27548 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cd40lgP27548 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cd40lgP27548 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cd40lgP27548 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cd40lgP27548 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.72■□□□□ 0.75
Cd40lgP27548 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Cd40lgP27548 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cd40lgP27548 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cd40lgP27548 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cd40lgP27548 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Cd40lgP27548 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cd40lgP27548 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Cd40lgP27548 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms