Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pde6bP23440 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
Pde6bP23440 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
Pde6bP23440 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pde6bP23440 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Pde6bP23440 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.63■■□□□ 1.37
Pde6bP23440 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pde6bP23440 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Pde6bP23440 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pde6bP23440 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pde6bP23440 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pde6bP23440 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Pde6bP23440 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pde6bP23440 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Pde6bP23440 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pde6bP23440 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Pde6bP23440 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pde6bP23440 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pde6bP23440 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Pde6bP23440 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC23.61■■□□□ 1.37
Pde6bP23440 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pde6bP23440 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pde6bP23440 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pde6bP23440 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pde6bP23440 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Pde6bP23440 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.59■■□□□ 1.37
Pde6bP23440 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC23.59■■□□□ 1.37
Pde6bP23440 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Pde6bP23440 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC23.59■■□□□ 1.37
Pde6bP23440 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC23.59■■□□□ 1.37
Pde6bP23440 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Pde6bP23440 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pde6bP23440 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pde6bP23440 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pde6bP23440 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pde6bP23440 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Pde6bP23440 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pde6bP23440 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pde6bP23440 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Pde6bP23440 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Pde6bP23440 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Pde6bP23440 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Pde6bP23440 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pde6bP23440 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pde6bP23440 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pde6bP23440 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pde6bP23440 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Pde6bP23440 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pde6bP23440 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pde6bP23440 Gm16464-201ENSMUST00000117815 1095 ntBASIC23.56■■□□□ 1.36
Pde6bP23440 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Pde6bP23440 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pde6bP23440 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pde6bP23440 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Pde6bP23440 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pde6bP23440 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pde6bP23440 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Pde6bP23440 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Pde6bP23440 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pde6bP23440 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pde6bP23440 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Pde6bP23440 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC23.52■■□□□ 1.36
Pde6bP23440 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC23.52■■□□□ 1.36
Pde6bP23440 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC23.52■■□□□ 1.36
Pde6bP23440 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC23.52■■□□□ 1.36
Pde6bP23440 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pde6bP23440 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC23.52■■□□□ 1.36
Pde6bP23440 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pde6bP23440 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pde6bP23440 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Pde6bP23440 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pde6bP23440 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Pde6bP23440 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
Pde6bP23440 Gm5131-201ENSMUST00000212776 1238 ntBASIC23.51■■□□□ 1.35
Pde6bP23440 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
Pde6bP23440 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pde6bP23440 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pde6bP23440 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC23.5■■□□□ 1.35
Pde6bP23440 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Pde6bP23440 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC23.5■■□□□ 1.35
Pde6bP23440 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
Pde6bP23440 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC23.49■■□□□ 1.35
Pde6bP23440 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pde6bP23440 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC23.49■■□□□ 1.35
Pde6bP23440 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23.49■■□□□ 1.35
Pde6bP23440 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pde6bP23440 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pde6bP23440 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pde6bP23440 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Pde6bP23440 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC23.48■■□□□ 1.35
Pde6bP23440 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Pde6bP23440 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC23.48■■□□□ 1.35
Pde6bP23440 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC23.47■■□□□ 1.35
Pde6bP23440 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC23.47■■□□□ 1.35
Pde6bP23440 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pde6bP23440 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pde6bP23440 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC23.47■■□□□ 1.35
Pde6bP23440 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pde6bP23440 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Pde6bP23440 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms