Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
P20040 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
P20040 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
P20040 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
P20040 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.21■□□□□ 0.67
P20040 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.21■□□□□ 0.67
P20040 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
P20040 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
P20040 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
P20040 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
P20040 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
P20040 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
P20040 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.2■□□□□ 0.66
P20040 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
P20040 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
P20040 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
P20040 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.2■□□□□ 0.66
P20040 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
P20040 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
P20040 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
P20040 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
P20040 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.19■□□□□ 0.66
P20040 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
P20040 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
P20040 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
P20040 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.19■□□□□ 0.66
P20040 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
P20040 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
P20040 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
P20040 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
P20040 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
P20040 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
P20040 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P20040 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P20040 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
P20040 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
P20040 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.17■□□□□ 0.66
P20040 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P20040 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P20040 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
P20040 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
P20040 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
P20040 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.16■□□□□ 0.66
P20040 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.16■□□□□ 0.66
P20040 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P20040 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P20040 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
P20040 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
P20040 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
P20040 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P20040 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
P20040 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P20040 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
P20040 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P20040 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
P20040 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
P20040 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
P20040 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P20040 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P20040 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
P20040 Cap2-205ENSMUST00000225824 1634 ntBASIC19.14■□□□□ 0.65
P20040 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P20040 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.13■□□□□ 0.65
P20040 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.13■□□□□ 0.65
P20040 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
P20040 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
P20040 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
P20040 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
P20040 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.12■□□□□ 0.65
P20040 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
P20040 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
P20040 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
P20040 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
P20040 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.11■□□□□ 0.65
P20040 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P20040 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P20040 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P20040 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P20040 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
P20040 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
P20040 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.1■□□□□ 0.65
P20040 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
P20040 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
P20040 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
P20040 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
P20040 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
P20040 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
P20040 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
P20040 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
P20040 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
P20040 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
P20040 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
P20040 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
P20040 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
P20040 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
P20040 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
P20040 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
P20040 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
P20040 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
P20040 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.08■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 102 ms