Protein–RNA interactions for Protein: P0C2J3

TY2B-LR1, Transposon Ty2-LR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-LR1P0C2J3 KTR1YOR099W 1182 nt9.27□□□□□ -0.92
TY2B-LR1P0C2J3 YPL062WYPL062W 405 nt9.27□□□□□ -0.92
TY2B-LR1P0C2J3 COX16YJL003W 357 nt9.27□□□□□ -0.93
TY2B-LR1P0C2J3 TAH11YJR046W 1815 nt9.26□□□□□ -0.93
TY2B-LR1P0C2J3 YGL235WYGL235W 537 nt9.26□□□□□ -0.93
TY2B-LR1P0C2J3 SOG2YOR353C 2376 nt9.26□□□□□ -0.93
TY2B-LR1P0C2J3 GIT1YCR098C 1557 nt9.26□□□□□ -0.93
TY2B-LR1P0C2J3 GSH1YJL101C 2037 nt9.25□□□□□ -0.93
TY2B-LR1P0C2J3 AMD1YML035C 2433 nt9.25□□□□□ -0.93
TY2B-LR1P0C2J3 GPH1YPR160W 2709 nt9.25□□□□□ -0.93
TY2B-LR1P0C2J3 PAN6YIL145C 930 nt9.24□□□□□ -0.93
TY2B-LR1P0C2J3 ORC5YNL261W 1440 nt9.24□□□□□ -0.93
TY2B-LR1P0C2J3 RPL5YPL131W 894 nt9.24□□□□□ -0.93
TY2B-LR1P0C2J3 YDR109CYDR109C 2148 nt9.24□□□□□ -0.93
TY2B-LR1P0C2J3 YGR182CYGR182C 354 nt9.23□□□□□ -0.93
TY2B-LR1P0C2J3 YCL041CYCL041C 495 nt9.22□□□□□ -0.93
TY2B-LR1P0C2J3 THI2YBR240C 1353 nt9.22□□□□□ -0.93
TY2B-LR1P0C2J3 LEU5YHR002W 1074 nt9.22□□□□□ -0.93
TY2B-LR1P0C2J3 MTC1YJL123C 1437 nt9.21□□□□□ -0.94
TY2B-LR1P0C2J3 BDF2YDL070W 1917 nt9.21□□□□□ -0.94
TY2B-LR1P0C2J3 YHR070C-AYHR070C-A 411 nt9.2□□□□□ -0.94
TY2B-LR1P0C2J3 CYB2YML054C 1776 nt9.2□□□□□ -0.94
TY2B-LR1P0C2J3 YEL053W-AYEL053W-A 348 nt9.19□□□□□ -0.94
TY2B-LR1P0C2J3 YCR097W-AYCR097W-A 267 nt9.19□□□□□ -0.94
TY2B-LR1P0C2J3 YNR042WYNR042W 429 nt9.19□□□□□ -0.94
TY2B-LR1P0C2J3 QCR8YJL166W 285 nt9.18□□□□□ -0.94
TY2B-LR1P0C2J3 RTG2YGL252C 1767 nt9.18□□□□□ -0.94
TY2B-LR1P0C2J3 BBP1YPL255W 1158 nt9.17□□□□□ -0.94
TY2B-LR1P0C2J3 GTT3YEL017W 1014 nt9.16□□□□□ -0.94
TY2B-LR1P0C2J3 BNA3YJL060W 1335 nt9.15□□□□□ -0.94
TY2B-LR1P0C2J3 OPI8YKR035C 642 nt9.15□□□□□ -0.94
TY2B-LR1P0C2J3 YGL194C-AYGL194C-A 243 nt9.14□□□□□ -0.95
TY2B-LR1P0C2J3 PAC10YGR078C 600 nt9.14□□□□□ -0.95
TY2B-LR1P0C2J3 DJP1YIR004W 1299 nt9.14□□□□□ -0.95
TY2B-LR1P0C2J3 QNS1YHR074W 2145 nt9.14□□□□□ -0.95
TY2B-LR1P0C2J3 XBP1YIL101C 1944 nt9.14□□□□□ -0.95
TY2B-LR1P0C2J3 PMT3YOR321W 2262 nt9.13□□□□□ -0.95
TY2B-LR1P0C2J3 SHM1YBR263W 1473 nt9.13□□□□□ -0.95
TY2B-LR1P0C2J3 YDL034WYDL034W 345 nt9.13□□□□□ -0.95
TY2B-LR1P0C2J3 PRO3YER023W 861 nt9.13□□□□□ -0.95
TY2B-LR1P0C2J3 YGR176WYGR176W 348 nt9.13□□□□□ -0.95
TY2B-LR1P0C2J3 ATO3YDR384C 828 nt9.12□□□□□ -0.95
TY2B-LR1P0C2J3 ITR1YDR497C 1755 nt9.12□□□□□ -0.95
TY2B-LR1P0C2J3 PGM1YKL127W 1713 nt9.12□□□□□ -0.95
TY2B-LR1P0C2J3 YCR075W-AYCR075W-A 228 nt9.12□□□□□ -0.95
TY2B-LR1P0C2J3 VPS61YDR136C 573 nt9.12□□□□□ -0.95
TY2B-LR1P0C2J3 DPH5YLR172C 903 nt9.12□□□□□ -0.95
TY2B-LR1P0C2J3 HSX1tR(CCU)J 72 nt9.11□□□□□ -0.95
TY2B-LR1P0C2J3 YHM2YMR241W 945 nt9.11□□□□□ -0.95
TY2B-LR1P0C2J3 KKQ8YKL168C 2175 nt9.1□□□□□ -0.95
TY2B-LR1P0C2J3 PGU1YJR153W 1086 nt9.1□□□□□ -0.95
TY2B-LR1P0C2J3 YMC1YPR058W 924 nt9.1□□□□□ -0.95
TY2B-LR1P0C2J3 IPI1YHR085W 1005 nt9.09□□□□□ -0.95
TY2B-LR1P0C2J3 ATP14YLR295C 375 nt9.09□□□□□ -0.95
TY2B-LR1P0C2J3 CSG2YBR036C 1233 nt9.09□□□□□ -0.95
TY2B-LR1P0C2J3 YAP1801YHR161C 1914 nt9.08□□□□□ -0.96
TY2B-LR1P0C2J3 SLO1YER180C-A 258 nt9.08□□□□□ -0.96
TY2B-LR1P0C2J3 PRM10YJL108C 1152 nt9.08□□□□□ -0.96
TY2B-LR1P0C2J3 YMR253CYMR253C 1245 nt9.08□□□□□ -0.96
TY2B-LR1P0C2J3 YBR144CYBR144C 315 nt9.08□□□□□ -0.96
TY2B-LR1P0C2J3 YDR154CYDR154C 351 nt9.07□□□□□ -0.96
TY2B-LR1P0C2J3 DAL82YNL314W 768 nt9.07□□□□□ -0.96
TY2B-LR1P0C2J3 APS3YJL024C 585 nt9.06□□□□□ -0.96
TY2B-LR1P0C2J3 NTG1YAL015C 1200 nt9.06□□□□□ -0.96
TY2B-LR1P0C2J3 RTT106YNL206C 1368 nt9.05□□□□□ -0.96
TY2B-LR1P0C2J3 NOB1YOR056C 1380 nt9.05□□□□□ -0.96
TY2B-LR1P0C2J3 CAD1YDR423C 1230 nt9.05□□□□□ -0.96
TY2B-LR1P0C2J3 YKL151CYKL151C 1014 nt9.05□□□□□ -0.96
TY2B-LR1P0C2J3 YCL065WYCL065W 369 nt9.04□□□□□ -0.96
TY2B-LR1P0C2J3 GAT3YLR013W 426 nt9.04□□□□□ -0.96
TY2B-LR1P0C2J3 YBR124WYBR124W 360 nt9.04□□□□□ -0.96
TY2B-LR1P0C2J3 TIM54YJL054W 1437 nt9.04□□□□□ -0.96
TY2B-LR1P0C2J3 NDC1YML031W 1968 nt9.03□□□□□ -0.96
TY2B-LR1P0C2J3 ALR1YOL130W 2580 nt9.03□□□□□ -0.96
TY2B-LR1P0C2J3 GIR2YDR152W 798 nt9.03□□□□□ -0.96
TY2B-LR1P0C2J3 SUF5tG(CCC)O 72 nt9.02□□□□□ -0.97
TY2B-LR1P0C2J3 YJR115WYJR115W 510 nt9.02□□□□□ -0.97
TY2B-LR1P0C2J3 AGP2YBR132C 1791 nt9.02□□□□□ -0.97
TY2B-LR1P0C2J3 CWC21YDR482C 408 nt9.01□□□□□ -0.97
TY2B-LR1P0C2J3 ECM15YBL001C 315 nt9.01□□□□□ -0.97
TY2B-LR1P0C2J3 YLR173WYLR173W 1827 nt9.01□□□□□ -0.97
TY2B-LR1P0C2J3 RPT6YGL048C 1218 nt9.01□□□□□ -0.97
TY2B-LR1P0C2J3 YLL059CYLL059C 507 nt9.01□□□□□ -0.97
TY2B-LR1P0C2J3 SAM4YPL273W 978 nt9.01□□□□□ -0.97
TY2B-LR1P0C2J3 ECM27YJR106W 2178 nt9.01□□□□□ -0.97
TY2B-LR1P0C2J3 COX9YDL067C 180 nt9□□□□□ -0.97
TY2B-LR1P0C2J3 EFM1YHL039W 1758 nt9□□□□□ -0.97
TY2B-LR1P0C2J3 CIS3YJL158C 684 nt8.99□□□□□ -0.97
TY2B-LR1P0C2J3 VRP1YLR337C 2454 nt8.97□□□□□ -0.97
TY2B-LR1P0C2J3 GYP8YFL027C 1494 nt8.97□□□□□ -0.97
TY2B-LR1P0C2J3 HIS7YBR248C 1659 nt8.97□□□□□ -0.97
TY2B-LR1P0C2J3 tN(GUU)CtN(GUU)C 74 nt8.96□□□□□ -0.97
TY2B-LR1P0C2J3 tN(GUU)FtN(GUU)F 74 nt8.96□□□□□ -0.97
TY2B-LR1P0C2J3 tN(GUU)GtN(GUU)G 74 nt8.96□□□□□ -0.97
TY2B-LR1P0C2J3 tN(GUU)KtN(GUU)K 74 nt8.96□□□□□ -0.97
TY2B-LR1P0C2J3 tN(GUU)LtN(GUU)L 74 nt8.96□□□□□ -0.97
TY2B-LR1P0C2J3 tN(GUU)N1tN(GUU)N1 74 nt8.96□□□□□ -0.97
TY2B-LR1P0C2J3 tN(GUU)N2tN(GUU)N2 74 nt8.96□□□□□ -0.97
TY2B-LR1P0C2J3 tN(GUU)O1tN(GUU)O1 74 nt8.96□□□□□ -0.97
TY2B-LR1P0C2J3 tN(GUU)O2tN(GUU)O2 74 nt8.96□□□□□ -0.97
Retrieved 100 of 7,029 protein–RNA pairs in 18.8 ms