Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
P03980 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P03980 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.78■□□□□ 0.28
P03980 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
P03980 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16.78■□□□□ 0.28
P03980 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P03980 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P03980 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
P03980 AC131739.1-201ENSMUST00000221692 1245 ntBASIC16.77■□□□□ 0.28
P03980 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
P03980 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
P03980 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
P03980 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P03980 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
P03980 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
P03980 Gm6821-201ENSMUST00000107540 542 ntBASIC16.76■□□□□ 0.27
P03980 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC16.76■□□□□ 0.27
P03980 Gm4799-201ENSMUST00000095396 657 ntBASIC16.76■□□□□ 0.27
P03980 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P03980 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P03980 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
P03980 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.76■□□□□ 0.27
P03980 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
P03980 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.75■□□□□ 0.27
P03980 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
P03980 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.75■□□□□ 0.27
P03980 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
P03980 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
P03980 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
P03980 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
P03980 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.75■□□□□ 0.27
P03980 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
P03980 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
P03980 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
P03980 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
P03980 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.74■□□□□ 0.27
P03980 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
P03980 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.74■□□□□ 0.27
P03980 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
P03980 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
P03980 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
P03980 Gm9812-201ENSMUST00000061934 968 ntBASIC16.73■□□□□ 0.27
P03980 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
P03980 Gm7199-201ENSMUST00000118327 1485 ntBASIC16.73■□□□□ 0.27
P03980 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
P03980 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P03980 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
P03980 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P03980 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
P03980 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.71■□□□□ 0.27
P03980 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
P03980 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
P03980 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
P03980 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
P03980 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.71■□□□□ 0.27
P03980 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
P03980 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.71■□□□□ 0.27
P03980 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
P03980 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
P03980 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
P03980 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.7■□□□□ 0.26
P03980 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P03980 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
P03980 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
P03980 AC122317.2-201ENSMUST00000218708 1248 ntBASIC16.7■□□□□ 0.26
P03980 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
P03980 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
P03980 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
P03980 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16.69■□□□□ 0.26
P03980 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P03980 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
P03980 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P03980 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P03980 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
P03980 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
P03980 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
P03980 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P03980 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P03980 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P03980 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
P03980 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
P03980 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P03980 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
P03980 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P03980 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.68■□□□□ 0.26
P03980 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
P03980 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
P03980 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P03980 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.68■□□□□ 0.26
P03980 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.68■□□□□ 0.26
P03980 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.68■□□□□ 0.26
P03980 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P03980 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
P03980 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
P03980 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P03980 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
P03980 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.67■□□□□ 0.26
P03980 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
P03980 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
P03980 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms