Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Hbb-b1P02088 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hbb-b1P02088 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Hbb-b1P02088 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Hbb-b1P02088 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hbb-b1P02088 AC153962.1-201ENSMUST00000218530 1948 ntBASIC15.42■□□□□ 0.06
Hbb-b1P02088 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hbb-b1P02088 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hbb-b1P02088 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hbb-b1P02088 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Hbb-b1P02088 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hbb-b1P02088 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hbb-b1P02088 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC15.41■□□□□ 0.06
Hbb-b1P02088 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hbb-b1P02088 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hbb-b1P02088 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hbb-b1P02088 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hbb-b1P02088 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hbb-b1P02088 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hbb-b1P02088 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hbb-b1P02088 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hbb-b1P02088 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hbb-b1P02088 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hbb-b1P02088 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.41■□□□□ 0.06
Hbb-b1P02088 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hbb-b1P02088 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hbb-b1P02088 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hbb-b1P02088 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hbb-b1P02088 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Hbb-b1P02088 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Hbb-b1P02088 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Hbb-b1P02088 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hbb-b1P02088 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Hbb-b1P02088 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hbb-b1P02088 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
Hbb-b1P02088 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hbb-b1P02088 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hbb-b1P02088 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hbb-b1P02088 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hbb-b1P02088 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hbb-b1P02088 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hbb-b1P02088 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Hbb-b1P02088 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Hbb-b1P02088 Gm4430-201ENSMUST00000192413 1943 ntBASIC15.38■□□□□ 0.05
Hbb-b1P02088 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hbb-b1P02088 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hbb-b1P02088 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hbb-b1P02088 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hbb-b1P02088 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hbb-b1P02088 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hbb-b1P02088 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Hbb-b1P02088 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC15.37■□□□□ 0.05
Hbb-b1P02088 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC15.37■□□□□ 0.05
Hbb-b1P02088 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC15.36■□□□□ 0.05
Hbb-b1P02088 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hbb-b1P02088 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hbb-b1P02088 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hbb-b1P02088 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Hbb-b1P02088 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hbb-b1P02088 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hbb-b1P02088 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hbb-b1P02088 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hbb-b1P02088 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hbb-b1P02088 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hbb-b1P02088 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Hbb-b1P02088 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hbb-b1P02088 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Hbb-b1P02088 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hbb-b1P02088 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hbb-b1P02088 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hbb-b1P02088 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hbb-b1P02088 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC15.34■□□□□ 0.05
Hbb-b1P02088 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Hbb-b1P02088 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC15.34■□□□□ 0.05
Hbb-b1P02088 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hbb-b1P02088 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hbb-b1P02088 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Hbb-b1P02088 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hbb-b1P02088 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC15.33■□□□□ 0.04
Hbb-b1P02088 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hbb-b1P02088 Gm4419-202ENSMUST00000226239 1431 ntBASIC15.33■□□□□ 0.04
Hbb-b1P02088 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hbb-b1P02088 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hbb-b1P02088 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hbb-b1P02088 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Hbb-b1P02088 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hbb-b1P02088 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hbb-b1P02088 Gm17082-201ENSMUST00000166043 1091 ntBASIC15.32■□□□□ 0.04
Hbb-b1P02088 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hbb-b1P02088 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Hbb-b1P02088 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hbb-b1P02088 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Hbb-b1P02088 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC15.31■□□□□ 0.04
Hbb-b1P02088 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Hbb-b1P02088 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Hbb-b1P02088 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hbb-b1P02088 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC15.31■□□□□ 0.04
Hbb-b1P02088 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hbb-b1P02088 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Hbb-b1P02088 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms