Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Best1O88870 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Best1O88870 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Best1O88870 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.98
Best1O88870 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Best1O88870 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.14■□□□□ 0.97
Best1O88870 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Best1O88870 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.14■□□□□ 0.97
Best1O88870 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Best1O88870 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.13■□□□□ 0.97
Best1O88870 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Best1O88870 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.13■□□□□ 0.97
Best1O88870 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Best1O88870 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Best1O88870 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Best1O88870 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.13■□□□□ 0.97
Best1O88870 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Best1O88870 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Best1O88870 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Best1O88870 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Best1O88870 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Best1O88870 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Best1O88870 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Best1O88870 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.12■□□□□ 0.97
Best1O88870 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Best1O88870 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Best1O88870 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Best1O88870 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Best1O88870 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Best1O88870 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Best1O88870 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Best1O88870 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Best1O88870 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Best1O88870 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Best1O88870 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Best1O88870 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.09■□□□□ 0.97
Best1O88870 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Best1O88870 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.09■□□□□ 0.97
Best1O88870 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Best1O88870 Gm15820-201ENSMUST00000201566 728 ntBASIC21.09■□□□□ 0.97
Best1O88870 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.09■□□□□ 0.97
Best1O88870 Gm10232-201ENSMUST00000089221 720 ntBASIC21.09■□□□□ 0.97
Best1O88870 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Best1O88870 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Best1O88870 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Best1O88870 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Best1O88870 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
Best1O88870 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Best1O88870 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Best1O88870 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Best1O88870 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Best1O88870 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.06■□□□□ 0.96
Best1O88870 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Best1O88870 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Best1O88870 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Best1O88870 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Best1O88870 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Best1O88870 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Best1O88870 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Best1O88870 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Best1O88870 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Best1O88870 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Best1O88870 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Best1O88870 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
Best1O88870 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.04■□□□□ 0.96
Best1O88870 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.04■□□□□ 0.96
Best1O88870 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Best1O88870 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Best1O88870 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Best1O88870 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Best1O88870 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.04■□□□□ 0.96
Best1O88870 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Best1O88870 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.03■□□□□ 0.96
Best1O88870 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Best1O88870 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Best1O88870 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.03■□□□□ 0.96
Best1O88870 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Best1O88870 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Best1O88870 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Best1O88870 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Best1O88870 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Best1O88870 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Best1O88870 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Best1O88870 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Best1O88870 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Best1O88870 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.02■□□□□ 0.96
Best1O88870 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.02■□□□□ 0.96
Best1O88870 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Best1O88870 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Best1O88870 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Best1O88870 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Best1O88870 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Best1O88870 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Best1O88870 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Best1O88870 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Best1O88870 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Best1O88870 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Best1O88870 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21■□□□□ 0.95
Best1O88870 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Best1O88870 AC093043.1-201ENSMUST00000226700 898 ntBASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms