Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.21■□□□□ 0.67
Slc28a2O88627 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc28a2O88627 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc28a2O88627 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc28a2O88627 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc28a2O88627 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Slc28a2O88627 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Slc28a2O88627 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slc28a2O88627 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Slc28a2O88627 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slc28a2O88627 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Slc28a2O88627 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc28a2O88627 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc28a2O88627 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.19■□□□□ 0.66
Slc28a2O88627 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc28a2O88627 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Slc28a2O88627 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Slc28a2O88627 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc28a2O88627 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Slc28a2O88627 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Slc28a2O88627 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.18■□□□□ 0.66
Slc28a2O88627 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc28a2O88627 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc28a2O88627 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc28a2O88627 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc28a2O88627 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc28a2O88627 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Slc28a2O88627 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.18■□□□□ 0.66
Slc28a2O88627 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc28a2O88627 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Slc28a2O88627 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.17■□□□□ 0.66
Slc28a2O88627 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc28a2O88627 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc28a2O88627 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc28a2O88627 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Slc28a2O88627 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc28a2O88627 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc28a2O88627 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc28a2O88627 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc28a2O88627 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Slc28a2O88627 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.16■□□□□ 0.66
Slc28a2O88627 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc28a2O88627 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc28a2O88627 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc28a2O88627 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Slc28a2O88627 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc28a2O88627 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc28a2O88627 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Slc28a2O88627 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc28a2O88627 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Slc28a2O88627 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc28a2O88627 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc28a2O88627 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc28a2O88627 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc28a2O88627 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc28a2O88627 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.15■□□□□ 0.66
Slc28a2O88627 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc28a2O88627 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Slc28a2O88627 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.14■□□□□ 0.65
Slc28a2O88627 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc28a2O88627 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Slc28a2O88627 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.13■□□□□ 0.65
Slc28a2O88627 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Slc28a2O88627 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc28a2O88627 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc28a2O88627 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.12■□□□□ 0.65
Slc28a2O88627 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Slc28a2O88627 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.12■□□□□ 0.65
Slc28a2O88627 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.12■□□□□ 0.65
Slc28a2O88627 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.12■□□□□ 0.65
Slc28a2O88627 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.12■□□□□ 0.65
Slc28a2O88627 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.12■□□□□ 0.65
Slc28a2O88627 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Slc28a2O88627 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Slc28a2O88627 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Slc28a2O88627 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Slc28a2O88627 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Slc28a2O88627 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc28a2O88627 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Slc28a2O88627 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Slc28a2O88627 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc28a2O88627 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Slc28a2O88627 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Slc28a2O88627 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc28a2O88627 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Slc28a2O88627 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Slc28a2O88627 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.1■□□□□ 0.65
Slc28a2O88627 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc28a2O88627 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Slc28a2O88627 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.1■□□□□ 0.65
Slc28a2O88627 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc28a2O88627 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.1■□□□□ 0.65
Slc28a2O88627 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Slc28a2O88627 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc28a2O88627 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc28a2O88627 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc28a2O88627 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Slc28a2O88627 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc28a2O88627 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Slc28a2O88627 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms