Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pde6dO55057 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pde6dO55057 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.16■□□□□ 0.34
Pde6dO55057 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.16■□□□□ 0.34
Pde6dO55057 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6dO55057 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6dO55057 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pde6dO55057 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.15■□□□□ 0.34
Pde6dO55057 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.15■□□□□ 0.34
Pde6dO55057 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pde6dO55057 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pde6dO55057 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6dO55057 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6dO55057 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Pde6dO55057 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6dO55057 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6dO55057 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6dO55057 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pde6dO55057 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Pde6dO55057 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6dO55057 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pde6dO55057 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.13■□□□□ 0.33
Pde6dO55057 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
Pde6dO55057 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.13■□□□□ 0.33
Pde6dO55057 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.13■□□□□ 0.33
Pde6dO55057 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pde6dO55057 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.13■□□□□ 0.33
Pde6dO55057 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6dO55057 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6dO55057 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6dO55057 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Pde6dO55057 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6dO55057 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pde6dO55057 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pde6dO55057 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.11■□□□□ 0.33
Pde6dO55057 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pde6dO55057 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pde6dO55057 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pde6dO55057 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6dO55057 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6dO55057 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pde6dO55057 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6dO55057 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6dO55057 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6dO55057 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6dO55057 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pde6dO55057 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6dO55057 Gm22567-201ENSMUST00000175542 342 ntBASIC17.09■□□□□ 0.33
Pde6dO55057 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6dO55057 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6dO55057 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6dO55057 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pde6dO55057 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pde6dO55057 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pde6dO55057 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pde6dO55057 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pde6dO55057 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pde6dO55057 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Pde6dO55057 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pde6dO55057 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6dO55057 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6dO55057 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6dO55057 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pde6dO55057 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6dO55057 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6dO55057 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6dO55057 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6dO55057 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6dO55057 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6dO55057 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pde6dO55057 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6dO55057 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.07■□□□□ 0.32
Pde6dO55057 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Pde6dO55057 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pde6dO55057 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6dO55057 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.06■□□□□ 0.32
Pde6dO55057 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6dO55057 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6dO55057 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pde6dO55057 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Pde6dO55057 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6dO55057 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pde6dO55057 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.05■□□□□ 0.32
Pde6dO55057 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pde6dO55057 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pde6dO55057 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pde6dO55057 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pde6dO55057 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pde6dO55057 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pde6dO55057 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Pde6dO55057 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pde6dO55057 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pde6dO55057 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.04■□□□□ 0.32
Pde6dO55057 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Pde6dO55057 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pde6dO55057 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6dO55057 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6dO55057 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pde6dO55057 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6dO55057 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms