Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
BckdkO55028 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
BckdkO55028 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.07■□□□□ 0.8
BckdkO55028 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.07■□□□□ 0.8
BckdkO55028 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BckdkO55028 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
BckdkO55028 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BckdkO55028 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BckdkO55028 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
BckdkO55028 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BckdkO55028 Gm5921-201ENSMUST00000075898 882 ntBASIC20.06■□□□□ 0.8
BckdkO55028 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
BckdkO55028 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BckdkO55028 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BckdkO55028 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
BckdkO55028 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BckdkO55028 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BckdkO55028 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BckdkO55028 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BckdkO55028 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.05■□□□□ 0.8
BckdkO55028 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.05■□□□□ 0.8
BckdkO55028 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BckdkO55028 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
BckdkO55028 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.05■□□□□ 0.8
BckdkO55028 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.05■□□□□ 0.8
BckdkO55028 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
BckdkO55028 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
BckdkO55028 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
BckdkO55028 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
BckdkO55028 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BckdkO55028 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BckdkO55028 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BckdkO55028 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BckdkO55028 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
BckdkO55028 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
BckdkO55028 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BckdkO55028 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
BckdkO55028 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BckdkO55028 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BckdkO55028 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BckdkO55028 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
BckdkO55028 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.02■□□□□ 0.79
BckdkO55028 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
BckdkO55028 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
BckdkO55028 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
BckdkO55028 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BckdkO55028 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.01■□□□□ 0.79
BckdkO55028 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
BckdkO55028 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.01■□□□□ 0.79
BckdkO55028 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BckdkO55028 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20■□□□□ 0.79
BckdkO55028 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BckdkO55028 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BckdkO55028 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20■□□□□ 0.79
BckdkO55028 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
BckdkO55028 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BckdkO55028 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BckdkO55028 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
BckdkO55028 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BckdkO55028 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.99■□□□□ 0.79
BckdkO55028 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BckdkO55028 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
BckdkO55028 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
BckdkO55028 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
BckdkO55028 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
BckdkO55028 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
BckdkO55028 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
BckdkO55028 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
BckdkO55028 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.98■□□□□ 0.79
BckdkO55028 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.98■□□□□ 0.79
BckdkO55028 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
BckdkO55028 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
BckdkO55028 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
BckdkO55028 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
BckdkO55028 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BckdkO55028 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BckdkO55028 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BckdkO55028 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
BckdkO55028 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BckdkO55028 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
BckdkO55028 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BckdkO55028 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BckdkO55028 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BckdkO55028 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BckdkO55028 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
BckdkO55028 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BckdkO55028 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BckdkO55028 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.94■□□□□ 0.78
BckdkO55028 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
BckdkO55028 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BckdkO55028 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BckdkO55028 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BckdkO55028 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
BckdkO55028 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BckdkO55028 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
BckdkO55028 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BckdkO55028 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
BckdkO55028 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
BckdkO55028 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BckdkO55028 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 147.1 ms