Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cacna1bO55017 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cacna1bO55017 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cacna1bO55017 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Cacna1bO55017 Golgb1-201ENSMUST00000023534 498 ntBASIC21.2■□□□□ 0.98
Cacna1bO55017 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.19■□□□□ 0.98
Cacna1bO55017 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.19■□□□□ 0.98
Cacna1bO55017 Gm12821-201ENSMUST00000120022 600 ntBASIC21.19■□□□□ 0.98
Cacna1bO55017 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.19■□□□□ 0.98
Cacna1bO55017 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cacna1bO55017 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cacna1bO55017 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cacna1bO55017 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cacna1bO55017 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cacna1bO55017 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.18■□□□□ 0.98
Cacna1bO55017 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cacna1bO55017 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.18■□□□□ 0.98
Cacna1bO55017 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.18■□□□□ 0.98
Cacna1bO55017 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.18■□□□□ 0.98
Cacna1bO55017 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cacna1bO55017 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cacna1bO55017 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cacna1bO55017 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cacna1bO55017 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.17■□□□□ 0.98
Cacna1bO55017 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.17■□□□□ 0.98
Cacna1bO55017 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cacna1bO55017 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cacna1bO55017 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cacna1bO55017 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cacna1bO55017 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
Cacna1bO55017 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.16■□□□□ 0.98
Cacna1bO55017 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.16■□□□□ 0.98
Cacna1bO55017 Gm10399-202ENSMUST00000202768 748 ntBASIC21.16■□□□□ 0.98
Cacna1bO55017 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cacna1bO55017 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cacna1bO55017 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cacna1bO55017 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.15■□□□□ 0.98
Cacna1bO55017 Gm40881-201ENSMUST00000223397 166 ntBASIC21.15■□□□□ 0.98
Cacna1bO55017 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cacna1bO55017 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cacna1bO55017 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cacna1bO55017 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cacna1bO55017 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cacna1bO55017 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Cacna1bO55017 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.14■□□□□ 0.97
Cacna1bO55017 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cacna1bO55017 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cacna1bO55017 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Cacna1bO55017 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cacna1bO55017 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cacna1bO55017 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cacna1bO55017 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Cacna1bO55017 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.13■□□□□ 0.97
Cacna1bO55017 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.12■□□□□ 0.97
Cacna1bO55017 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cacna1bO55017 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cacna1bO55017 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Cacna1bO55017 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Cacna1bO55017 Gm45417-201ENSMUST00000209533 758 ntBASIC21.12■□□□□ 0.97
Cacna1bO55017 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cacna1bO55017 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cacna1bO55017 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cacna1bO55017 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cacna1bO55017 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.11■□□□□ 0.97
Cacna1bO55017 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cacna1bO55017 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.11■□□□□ 0.97
Cacna1bO55017 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cacna1bO55017 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cacna1bO55017 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cacna1bO55017 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.1■□□□□ 0.97
Cacna1bO55017 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.1■□□□□ 0.97
Cacna1bO55017 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cacna1bO55017 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.09■□□□□ 0.97
Cacna1bO55017 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cacna1bO55017 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cacna1bO55017 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.09■□□□□ 0.97
Cacna1bO55017 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cacna1bO55017 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cacna1bO55017 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cacna1bO55017 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cacna1bO55017 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cacna1bO55017 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Cacna1bO55017 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cacna1bO55017 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cacna1bO55017 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cacna1bO55017 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Cacna1bO55017 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Cacna1bO55017 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.08■□□□□ 0.96
Cacna1bO55017 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Cacna1bO55017 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Cacna1bO55017 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cacna1bO55017 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cacna1bO55017 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cacna1bO55017 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cacna1bO55017 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cacna1bO55017 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cacna1bO55017 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cacna1bO55017 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cacna1bO55017 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
Cacna1bO55017 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 99.3 ms